Burkholderia cepacia DDS 7H-2: DM42_624
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Entry
DM42_624 CDS
T03302
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03420
Nucleotide excision repair
bced03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM42_624
03430 Mismatch repair
DM42_624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_624
Enzymes [BR:
bced01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM42_624
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM42_624
MMR (mismatch excision repair)
Other MMR factors
DM42_624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIO47274
LinkDB
All DBs
Position
1:complement(708270..710084)
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AA seq
604 aa
AA seq
DB search
MPSRNVGTAYLAQAAELAGNPGQLAAYNSQGHCVVLAGPGSGKTKTLVLKLARILAEDVE
APRGVACITYSQECARELARRIENLGLQQAPNLFIGTVHGFCLRHLLMPYGRLAGLPISF
PLSVATQRVSDRLLKQTGDALFGQNHPYKVIDLGRHRRSVLNRNSVAWRSEEELAAWAEA
YEAALRDEGLIDYDDMVVFGQRLIAEHDWVLPLVQAKFPVLAVDEYQDLGVALHRIVKRL
AFDGGVRLFAVGDADQSIYGFTGADGALLMELAARRDIEPVQLQLNYRSGAGIVTASEMA
LGEARGYQASDPARQTTIEFVLRPGGMADQAAHAVAQIIPAALASKPGRTLGDIAILYKD
YRAGDIVAEAVATGGLDHIRVDTAAPYRKVALTSWVEDCAAWCAGGWRVGRPQLRGLLDR
YRAFHRASLDDSQAKREEQELTALLWELRADQQPAREFVASLRNGVVDHLLAAELALADQ
KEQLDRMTAALAEGGALASLDITSLGGRDGSPDHLNLLTLHSAKGCEYDVVIMVGLDLGN
LPWRNETPEKLRESRRLFYVGLTRARDEVHMLYSGFVDGRYGPMRFGRSPFLDELEARMR
AAGI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgcgtaacgtcggtacagcctacctggcgcaggctgccgagttggctggaaat
ccagggcagttggcagcttacaactctcaaggacattgtgtggtactcgctggtcccggg
agcggtaagaccaagacactcgtcctaaagctcgcccgcatcctggccgaagacgtcgag
gcccctcgtggcgttgcgtgcatcacttatagccaggagtgcgctcgcgaactcgctcgc
cgaattgaaaacttgggacttcagcaggcacctaatcttttcattggtacggtccatggg
ttctgtctgcgtcatctcttgatgccgtatggacgcctggccggcctgcccatatctttc
ccactttcggtagccactcaacgagtcagtgatcggttgttgaagcaaactggagatgcg
cttttcggccagaaccatccgtacaaagttattgacctcgggcggcatcgccgttccgtg
ctcaatcgaaatagcgtcgcttggcgtagcgaggaggaactcgctgcctgggccgaggcc
tacgaggccgctctgcgcgacgaggggctgattgactacgatgacatggttgtcttcggc
cagcgtttgatcgccgagcacgactgggtactacctctggttcaggcaaaattccccgtg
ctcgcggtggatgagtaccaggatttaggcgtggcactgcatcgcatcgtcaaacgcctt
gccttcgacgggggtgtccgacttttcgctgtcggggatgcggatcagtcgatatatgga
tttacgggagctgatggcgcgttgctcatggaattggcggctcgcagagacattgagcct
gtccagcttcaattaaattaccgttctggtgcagggatcgtgactgcgtcagagatggcg
cttggagaagcccgaggctatcaagcgagcgatcctgcgcgacaaacgaccatcgaattt
gtcctgcgcccgggtggtatggcggaccaggctgcgcacgccgtcgcgcagatcattccg
gcggccttagcctccaagccgggacgaacactgggcgatatcgcgatcctatacaaagac
tatcgcgcaggcgatatcgtggctgaagctgtggcaaccggtggtctcgatcacatccgt
gtggataccgcagcaccttaccgcaaggttgccctaacaagttgggtagaagattgtgcg
gcgtggtgcgcgggtggctggcgtgttggacgcccacaattgcgtggactactcgaccgc
tatcgcgcatttcatcgggcgagcttggacgattcacaggccaagcgcgaagagcaagag
ctaaccgccttgctatgggagctgcgtgctgaccagcaacctgcgcgagaatttgttgct
tcgctgcgcaacggtgtagtggatcatctgctggcggctgaattggcgctcgctgatcag
aaggagcaactggatcgcatgacggcagcgctcgctgaaggcggtgcactggcttcgcta
gacatcacgagtttgggcggtcgggacggttcgcccgatcacctgaatctgctgacactg
cattccgcaaagggctgtgagtacgacgtcgtcatcatggttggactcgacctcggaaat
ctgccgtggcgcaatgaaactccagagaagttgcgcgaaagtcgccggctcttctatgtg
ggactcacacgtgctcgcgacgaggtccacatgctgtattcgggcttcgttgatggccgc
tatggccctatgcgctttgggcgctcgccattccttgatgagctggaggcgcgaatgcgt
gccgctggcatttga
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