Burkholderia cepacia DDS 7H-2: DM42_6286
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Entry
DM42_6286 CDS
T03302
Name
(GenBank) bacterial extracellular solute-binding family protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM42_6286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_6286
Transporters [BR:
bced02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DM42_6286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AIO45872
LinkDB
All DBs
Position
2:3101267..3102397
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AA seq
376 aa
AA seq
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MQPGDSRGVRLIRGIGAGTRARRAVRTLLVILTVGLLAPVPPAVAASPETVNDNVLRVLA
WPGYADSDIVSAFEAQFHVRVEVTLVDSDEALWTRLHSASPPPYDVLAANTAEIQRYAHE
HLLAPVDLSRIPNRRRQLPNFQQLATIGGLVQDGASYAVPFTYSSMGLIYDRKQVPAAPR
SMRELWNPRYRGKVLDFNSAQHNFSFTALALGYPDPFRLSPAQTLAVARKLIDLRRNLLT
YYTLPEEATALFVQHRAALMFGNYGTQQVEQLRRAGADVGYVIPDEGALAWLDCWAVTRG
ALRPELAFAWINYMLEPAIGALLTERQGLANTLEPPRGLDTGHEHLVWLQPVEDIARRES
LWGRIVSGDRPERFGK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgggcgattcacgcggggtccgattgatcaggggaatcggcgcaggcacgcgc
gcgcgccgcgccgtgcgtacgctgcttgtcatattgacggtaggcttactggcgcccgtc
ccgccggccgtcgccgcctcacccgaaaccgtcaacgacaacgtgctgcgcgtgctggcg
tggcccggttatgcggacagcgatatcgtcagcgcattcgaggcgcagtttcatgtgcgt
gtggaagtgacgctggtcgattccgacgaagcgttgtggacgcggttgcacagcgcctcg
ccgccgccgtacgacgtgctggccgcgaacacggccgagatccagcgctatgcgcatgag
cacctgctcgcgccggtcgacctgtcgcgcatcccgaaccggcggcggcagttgccgaat
ttccagcagctcgcgacgatcggcggcctcgtgcaggacggcgcgtcctacgcagtcccg
ttcacctattcgtcgatggggctgatctacgaccgcaagcaggtgccggccgcgccgcgc
tcgatgcgcgaactgtggaatccgcgctatcgcggcaaggtgctcgacttcaacagcgcg
cagcacaatttctcgttcacggcgctggcgctcggctatcccgatccgttccgtctgtcg
cccgcgcagacgcttgccgtcgcgcgcaagctgatcgacctgcgccgcaacctgctgacc
tactacacgcttccggaagaggcgaccgcgctgttcgtccagcatcgcgcggcgctgatg
ttcggcaactacggcacgcagcaggtcgagcagttgcgccgcgccggcgcggacgtcggc
tacgtgatcccggacgaaggcgcgctcgcgtggctcgactgctgggccgtcacgcgcggc
gcgctgcgtcccgagctcgcgttcgcgtggatcaactacatgctcgaaccggcgatcggc
gcgctgctgaccgagcgccaggggctcgcgaacacgctcgagccgccgcgcggcctcgac
accgggcacgagcatctcgtatggcttcagcccgtggaggacatcgcgcgccgcgaatcg
ctgtggggccgcatcgtgtcgggcgaccggccggagcggttcggaaaatga
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