Burkholderia cepacia DDS 7H-2: DM42_6851
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Entry
DM42_6851 CDS
T03302
Symbol
xylF
Name
(GenBank) 2-hydroxymuconic semialdehyde hydrolase
KO
K10543
D-xylose transport system substrate-binding protein
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DM42_6851 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_6851 (xylF)
Transporters [BR:
bced02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
DM42_6851 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
RHH_8
BRCT
Motif
Other DBs
NCBI-ProteinID:
AIO43699
LinkDB
All DBs
Position
3:533450..534478
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AA seq
342 aa
AA seq
DB search
MKSVTRRTVLSSLAGAAALAILALGTPLAHASKDKPEIGFCIDDLRVERWSRDRDYFVAA
ATKLGAKVSVQSADASEARQISQIENLISRGVDVIVIVPFNSKTLGNVVAEARKAGIKVV
SYDRLILDADVDAYISFDNEKVGELQAQGVFDAKPKGNYFLLGGAPTDNNAKMLREGQLK
VLKPAIDRGDIKVVGQQWVPEWSASTALRIVEDALTANNNKIDAIVASNDGTAGGAIQAL
AAQHLAGKVPVSGQDADLAAVKRVIAGTQTMTVYKPLKLIASEAAKLAVDLAKGAKPAFN
AQYDNGRKKVDTVLLQPTLLTKRNVDVVVKDGFYTQAHLASQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgtaacgcgtcgtaccgtattgagttcgctggccggcgccgccgcgctcgcg
atcctcgcgctgggcacgccgctcgcccatgcgagcaaggacaagcccgagatcggtttt
tgcatcgacgacctgcgcgtcgagcgctggtcgcgcgatcgcgactatttcgtcgcggcc
gcgacgaagctcggcgcgaaggtgtcggtgcagtccgccgatgcgagcgaggcgcggcag
atttcgcagatcgagaacctgatctcgcgcggcgtcgacgtgatcgtgatcgtgccgttc
aactcgaagacgctcggcaacgttgtcgccgaggcgcggaaggccggcatcaaggtcgtg
tcgtacgaccgcctgattctcgatgcggacgtcgacgcgtacatctcgttcgacaacgag
aaggtcggcgagctgcaggcgcagggcgtcttcgatgcgaagccgaagggcaactatttc
ctgctgggcggcgcgccgaccgacaacaacgcgaagatgctgcgcgaaggacaactgaag
gtgctcaagccggcgatcgaccgaggcgacatcaaggtcgtcggccagcagtgggtgccc
gaatggagcgcatcgaccgcgctgcggatcgtcgaggatgcgctgaccgcgaacaacaac
aagatcgatgcgatcgtcgcgtcgaacgacggcacggccggcggcgcgatccaggcgctc
gccgcgcagcatctggccggcaaggtgccggtatccgggcaggacgcggatctggccgcg
gtcaagcgcgtgatcgccggcacgcagacgatgaccgtctacaagccgttgaagctgatc
gcgagcgaagccgcgaagctcgcggtcgatctcgcgaagggcgcgaagcccgcgttcaac
gcgcaatacgacaacggcaggaagaaggtcgatacggtgctgctgcagccgacgctgctg
accaagcgcaacgtcgacgtcgtcgtgaaggacggcttctatacccaggcccatctggcg
agccagtaa
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integrated database retrieval system
