Burkholderia cepacia DDS 7H-2: DM42_6885
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Entry
DM42_6885 CDS
T03302
Symbol
nikE
Name
(GenBank) nickel import ATP-binding protein NikE
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM42_6885 (nikE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_6885 (nikE)
Transporters [BR:
bced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DM42_6885 (nikE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
SMC_N
AAA_22
ATP-synt_ab
AAA
AAA_29
nSTAND3
AAA_25
NACHT
AAA_33
nSTAND_NTPase5
nSTAND1
NB-ARC
Mg_chelatase
AAA_30
MeaB
Pox_A32
CbiA
DUF87
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AIO43672
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All DBs
Position
3:574196..576064
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AA seq
622 aa
AA seq
DB search
MRHESNPLVEVRGLRVVGGRPGGEETTIVHGVDFDIGRGEVLALIGESGSGKTTIALSLM
GHARAGCRIAGGSVKLDGSDVCTLSAAALTALRGRKVAYIAQSAAAAFNPSRTILDQVIE
SALIHKTMTKRDAQAKAIELFRALALPEPETIGKRYPHQVSGGQLQRLMAAMALITDPEL
VILDEPTTALDVTTQIDVLQAFKRVIRRYGMSAVYVSHDLAVVAQMADRIVVLSDGVIRE
AGATEQILHAPTHPYTQSLIAAVTPNDAERGGEVRRPAAPAPLLDVRGAIAGYGGRAANG
WPAKVILHEVDLRIGRGQTVGVIGESGSGKTTLAKVIAGLVPATGGEILLDGVPLARDIG
KRTKEQHRRVQIVFQNADTALNPVHTVERTLARPLAFYHGIKGARARQRVAELLELVRLP
PAVAARRTGELSGGQKQRVNLARALAAEPDLILCDEVTSALDTVVGAAIIELLRDLQAKL
GVSYVFITHDIAKVRAISDDIVVLYAGRRVETGSRDALCAPPYHPYSHLLVSSAPELRAG
WLDDAAERCHRPLVPIGEREHEAELCPFLSRCAMRVDGVCNRTAPSLRTLGNGAQVLCHR
SEEDLARFQAEPAPAGVTPVQL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacgaatcgaacccgctcgtcgaggtgcgcgggctgcgcgtggtcggcggccgg
ccgggcggcgaggaaacgacgatcgtccacggcgtcgacttcgacatcggacgcggcgag
gtgctcgcgctgatcggcgaatcgggctccggcaagacgacgatcgcgttgtcgctgatg
ggccatgcgcgcgccggctgccggatcgccggcggctcggtgaagctcgacggctccgac
gtgtgcacgctttccgcagcggcgctgaccgcgctgcgcggccgcaaggtcgcgtatatc
gcgcagagcgccgccgccgcgttcaatccgtcgcgcacgattctcgaccaggtgatcgag
agcgcgctgatccacaagacgatgacgaagcgcgacgcgcaggcgaaggcgatcgagctg
tttcgcgcgctcgcgctgccggagccggagacgatcggcaagcgctatccgcaccaggtc
tcgggcgggcagttgcagcggctgatggccgcgatggcgctgatcaccgatccggaactg
gtgatcctcgacgagccgaccaccgcgctcgacgtgaccacgcagatcgacgtgctgcag
gcgttcaagcgcgtgatccggcgctacgggatgagcgcggtgtacgtgtcgcacgacctg
gccgtggtcgcgcagatggccgaccggatcgtcgtgctgagcgacggcgtgatccgcgag
gcgggggcgaccgaacagatcctgcatgcgccgacgcatccgtacacgcagagcctgatc
gcggcggtcacgccgaacgatgccgaacgtggcggggaagtgcgacgaccggccgcgccg
gcgccgctgctcgacgtgcgcggcgcgatcgccggttacggcggccgcgcggcgaacggc
tggcccgcgaaggtgatcctgcatgaagtcgacctgcgcatcgggcgcgggcagaccgtc
ggcgtgatcggcgaatccggttccggcaagacgacgctcgcgaaggtgatcgcgggcctc
gtgccggcgaccggcggcgagatcctgctcgacggcgtgccgctcgcgcgcgatatcggc
aagcgcacgaaggagcagcatcgccgcgtgcagatcgtgttccagaacgccgataccgcg
ctcaatccggtgcataccgtcgagcgcacgctcgcgcgaccgctcgcgttctatcacggg
atcaagggcgcgcgtgcgcggcagcgcgtcgcggaactgctcgaactcgtgcggctgccg
ccggcggtggccgcgcggcgtaccggcgaattgtccggcgggcagaagcagcgcgtgaat
ctcgcgcgggcgctcgccgccgaacccgacctgatcctgtgcgacgaggtcacgtcggcg
ctcgacaccgtggtcggcgccgcgatcatcgaactgctgcgcgacctgcaggcgaagctc
ggcgtgtcgtacgtgttcatcacgcacgacatcgcgaaggtgcgcgcgatcagcgacgac
atcgtcgtgctgtatgcgggccggcgcgtggagacgggcagtcgcgacgcgctgtgcgcg
ccgccttatcacccgtattcgcatctgctggtgtcgtccgcgccggaattgcgcgcgggc
tggctcgacgatgcggccgagcgctgccatcgtccgctggtgccgatcggcgagcgcgag
cacgaggccgagctgtgtccgttcctgtcgcgctgcgcgatgcgcgtggacggcgtgtgc
aaccgcacggccccgtcgctgcgcacactcgggaacggcgcgcaggtgctgtgccatcgc
agcgaggaggatctcgcgcgctttcaggcggagccggcgcccgcgggtgtcacgccggtg
cagctgtag
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