Burkholderia cepacia DDS 7H-2: DM42_6920
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Entry
DM42_6920 CDS
T03302
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_6920
Enzymes [BR:
bced01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DM42_6920
DNA repair and recombination proteins [BR:
bced03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DM42_6920
Prokaryotic type
DM42_6920
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIO43293
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All DBs
Position
3:613672..615192
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AA seq
506 aa
AA seq
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MTRTELPYESRPVIVWFRDDQRLSDNPALSHAVSTGNPVVCVYVYDPAPKLGRAMGGAQK
WWLHQSLKKLDGSLSALGGSLLVLRGNEHEAIRSLAVETQAAMVFWNRRYSKAQTEMDAS
IKKDLIGRGIDVSTFNGHLLREPWTVATREGLPFQVFSAYWRAARRDNFFPPCPLSAPAR
ITFFPVSRNVSAHVSTLPELALQPSTPDWAEGLRATWRCGEEAAGHQLEAFIEHSFSDYA
GARDFPATRATSRLSPYLRFGNISARQVWYATLSAVDAMRSRRVVRIDDAKNESLNKFFS
ELGWREFSYYLLYHCKPLHQFNFRRQFDFMPWRTDAKALRAWQRGKTGYPLVDAGMRELW
HTGWMHNRVRMVTASFLTKHLLIDWREGEAWFWDTLVDADEASNPAGWQWASGSGADAAP
YFRIFNPVLQGKKFDPRGEYTRRWVPELSALPAETVHSPWTASAEALQEASIALGASYPF
PIVDHQDARARALSSVEILNIHSQMK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaccgaattgccgtatgaatcccgccccgttatcgtatggtttcgggatgac
caacgactcagcgacaatcccgcactctctcatgcggtcagtaccggcaatcctgtagtt
tgcgtctacgtctacgaccctgccccgaagctcgggcgcgccatggggggcgcgcaaaag
tggtggctgcaccagtccttgaaaaaactcgacggctcgctttccgctctcggcggctcg
ctgctcgtgcttcgcggtaacgaacacgaagccatcagaagcctcgccgtcgagacccag
gcggcaatggttttctggaatcgccgctactcgaaagcgcaaacggaaatggatgcatcg
atcaagaaagacctgatcgggcgcggcatcgacgtgtcgacattcaatggccatcttttg
cgcgaaccctggacagtggccacgcgcgaaggcttgccgttccaggtattcagcgcgtac
tggagagccgctcgccgagataatttttttccgccgtgcccactgtcggcgcccgctcgg
atcacgttctttcccgtctccagaaacgtcagcgcacacgtcagtacgcttcccgaactt
gcgctgcagccctcgacgccggactgggcggagggcctgcgtgcaacctggcgatgcggc
gaggaggcggccgggcatcaactcgaggccttcattgaacactcgttttccgactatgcc
ggcgctcgagattttccggccactcgagcgacgagccggctctctccgtatcttcgcttc
ggaaatatctcggcccggcaggtgtggtacgcgacgttatcagcggtagacgcgatgcga
agcaggcgagttgttcgcattgacgatgccaaaaatgagtcgttgaacaagttcttcagt
gaactcggatggagagaattctcgtattaccttctctatcactgcaaaccccttcatcag
ttcaattttcggcgtcagtttgatttcatgccgtggcgtaccgacgccaaggcgcttcgc
gcgtggcaaagggggaaaacaggatacccgctggtcgacgccggcatgcgcgagctttgg
cacacaggctggatgcacaaccgcgtgcgcatggtgacagcgtcatttctcaccaagcat
ttgctgatcgactggcgcgagggcgaagcatggttctgggatacgctggttgatgcggac
gaggcaagcaatcccgccgggtggcaatgggcgtcaggaagcggcgccgacgcagccccg
tattttcgaatcttcaatcctgttttgcaggggaaaaagttcgacccgagaggcgaatac
acgcggcggtgggtgcccgaactatctgcactccccgccgaaacggtccacagcccatgg
accgcttccgctgaagcgctgcaggaagcatccatcgcgctcggcgcaagttatcccttt
ccgatcgtggatcaccaggatgcacgcgcgcgcgccctcagttcggtagagatcctgaat
atacatagccaaatgaagtga
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