Burkholderia cepacia DDS 7H-2: DM42_72
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Entry
DM42_72 CDS
T03302
Name
(GenBank) hypothetical protein
KO
K12518
outer membrane usher protein PapC
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bced02044
]
DM42_72
Secretion system [BR:
bced02044
]
Chaperone-usher system
P pilus assembly protein
DM42_72
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Glyco_hydro_38C
Motif
Other DBs
NCBI-ProteinID:
AIO49349
LinkDB
All DBs
Position
1:complement(90878..93331)
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AA seq
817 aa
AA seq
DB search
MLVVGSQSQATEFNSSFLDIDGTSNVDLSQFSQADFTLPGEYMLDVQVNDLFYGLQAIEF
IAVDASGAGKPCLRPELVAQFGLKPSLVKDLPRFQGGRCVDLGAIEGATVRYLKSDGRLK
ITIPQAALEFTDSTYLPPARWSEGIPGAMLDYRVIANTNRNFGAGGGQTNAIQAYGTVGA
NWDAWRFRGDYQAQSNVGNTAYADRTFRFSRLYAFRALPSIQSTVTFGDDYLTSDIFDTF
ALTGASIRSDDRMLPPSLRGYAPLISGVARTNATVTVSQAGRVLYVTRVSPGAFALQNIN
TSVQGTLDVAVEEEDGSVQRFQVTTAAVPFLARAGQLRYKAAVGKPRLFGGAGITPFFGF
GEIAYGLPFDVTAYGGFIAASGYTSIALGVGRDFGAFGAVSADVTHARAKLWWNGATRNG
NSYRINYSKHFDGLDADVRFFGYRFSEREYTNFAQFSGDPTAYGLANSKQRYSATLSKRF
GDTSTYFSYDQTTYWERANEQRVGLTLTRAFSIGTLRNLNVSVSAFRTQSAGASGNQVSV
TATLPIGGRHTVTSNLTTGSGSTSVNAGYIYDDPNGRTYQINAGATDGRASANASYRQRS
SAYQLTAQASTLANAYAAASLEVDGSFVATQYGVSAHANGNAGDTRLLVSTDGVPDVPLS
GTLTHTDSRGYAVLDGISPYNVYDATVNVEKLPLEVQVTNPIQRMVLTDGAIGFVKFSAA
RGSNLYLTLTDGAGKPLPFGASVQDAANGKELGIVGEAGAAFLTQVQPKSTLAVRAGERT
LCTIAALPNQLQLEGTPIPVTCQPPGESHAAAARAER
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtcgtcggcagccagagccaggcgacggaattcaattcgtcgttcctcgacatc
gacggaacgagcaacgtcgacctgtcgcagttctcgcaggcggacttcacgctgcccggc
gagtacatgctcgacgtgcaggtcaacgacctgttctacgggctgcaagcgatcgaattc
atcgcggtcgacgcgtcgggcgccggcaagccgtgcctgcggcccgagctcgtcgcgcag
ttcgggctgaagccgtcgctcgtgaaggatctgccgcgcttccagggcgggcgttgcgtc
gacctcggcgcgatcgagggcgcgaccgtgcgttacctgaaaagcgacgggcggctcaag
atcacgattccgcaggccgcgctcgaattcaccgattcgacctacctgccgccggcgcgc
tggtccgaaggcattccgggggcgatgctcgattaccgcgtgatcgcgaacacgaaccgc
aacttcggtgcgggcggcggacagacgaatgcgatccaggcctacgggacggtgggcgcg
aactgggatgcgtggcgctttcgcggcgactatcaggcgcaatcgaacgtgggtaacacg
gcgtacgcggaccggacgttccgcttcagccggctgtatgcgtttcgtgcgctgccatcg
atccagtcgacggtgacgttcggcgacgactacctgacctccgacattttcgacacgttc
gcgctgacgggcgcgtcgatccgcagcgacgatcgcatgctgccgccgtcgctgcgcggc
tatgcgccgctgatctcgggcgtcgcgcgcaccaacgcgaccgtgacggtgtcgcaggcc
ggccgcgtgctgtacgtgacgcgcgtgtcgccgggcgcgttcgcgctgcagaacatcaac
acgagcgtgcagggcacgctcgacgtggcggtcgaggaagaagacggcagcgtgcagcgc
ttccaggtgacgacggccgccgtgccgttcctcgcgcgcgccgggcagttgcgctacaag
gccgcggtcggcaagccgcgcctgttcggcggcgccggcatcacgccgttcttcggcttc
ggcgaaatcgcgtacggcctgccgttcgacgtcacggcgtatggcggtttcatcgccgcg
tcgggctacacgtcgatcgcgctcggcgtcggtcgcgatttcggcgcgttcggcgcggtg
tcggccgacgtcacgcatgcgcgggcgaagctgtggtggaacggcgcgacgcgcaacggc
aactcgtatcgcatcaactattcgaagcacttcgacgggctcgatgccgacgtgcgcttc
ttcggctaccgcttctccgagcgcgaatacacgaacttcgcacagttctccggcgacccg
accgcatacggcctcgccaacagcaagcagcgctactcggcgacgctgtcgaagcgtttc
ggcgacacgtcgacctatttttcctacgaccagacgacctactgggaacgtgcgaacgag
cagcgcgtcggcctcacgctgacgcgcgcgttttcgatcggcacgctgcgcaacctgaac
gtcagcgtgtcggctttccgcacgcagagcgcgggcgcaagcggcaaccaggtctcggtc
accgcgacgttgccgatcggcgggcgtcacaccgtcacgtcgaacctgacgacgggcagc
ggcagcacgagcgtgaacgcgggctacatctacgacgatccgaatggccgcacctaccag
atcaacgcgggcgcgaccgacggacgcgcgtcggcgaacgcgagctaccgccagcgctcg
tcggcgtatcagctgaccgcgcaggcatcgacgctcgccaacgcgtatgcggccgcgtcg
ctcgaagtcgacggctcgttcgtcgcgacgcagtacggcgtgtccgcgcacgccaacggc
aatgcgggcgacacgcggctgctggtgtcgaccgacggcgtgcccgacgtgccgctgtcc
ggcacgcttacgcataccgattcgcgcggctacgcggtgctcgacggcatctcgccgtac
aacgtgtacgacgcgaccgtcaacgtcgagaagctgccgctcgaagtgcaggtgacgaac
ccgatccagcgcatggtgctgaccgacggcgcgatcggcttcgtgaagttctccgccgcg
cgcggcagcaacctgtacctgacgctgaccgacggggccggcaagccgctgccgttcggg
gcgtcggtgcaggacgcggcgaacggcaaggaactcggcatcgtcggcgaagccggcgcg
gcgttcctgacccaggttcagccgaaatccacgctggcggtgcgggcgggcgaacgcacg
ctctgcacgatcgccgcactgccgaaccagctccaactcgaaggcacgccgattccggtg
acgtgccagccgcccggcgagtcgcatgcagcggccgcgcgggccgaacgatga
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