Brucella ceti TE28753-12: V568_102215
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Entry
V568_102215 CDS
T02935
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcee
Brucella ceti TE28753-12
Pathway
bcee03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V568_102215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcee03400
]
V568_102215
Enzymes [BR:
bcee01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V568_102215
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V568_102215
DNA repair and recombination proteins [BR:
bcee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V568_102215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AHB02751
LinkDB
All DBs
Position
1:complement(2006075..2006956)
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AA seq
293 aa
AA seq
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MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL
TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASAR
IIYNDPRRFGFMLFAEKGALEEYPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALLD
QRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGEMDVMERLAGAIRSVIAQAIAAGGSSLK
DYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagaggtcgaaacggttcgccgtggtctgcaacccttcatggaaggg
gcaaccgttgtgcgggtggagcagaatcggcccgacctgcgctttgcctttcctgaaaat
tttgccgaacgcctttccggcaggcgcatcgaggcgcttggccgccgtgcgaaatatctg
accgtccatctcgatgacgggctttcgatcatcagccatctcggcatgtccggctcgttt
cgcattgaggcggaggatgcgcaaggtttgccgggcgggtttcatcacgagcgctccaag
aacagcctgcatgaccatgtggtctttcacctcatgcgcccggacggtgcgtctgcacgc
attatttataatgatccgcgccgcttcggtttcatgctctttgccgaaaagggcgcgctg
gaggaatatccgctcctgaaagaccttggtgtggagccgaccggcaatctcctgtcgggc
gaggttctggccgcgcttttcaagggacgccgcacgcccctgaaggccgccttgctcgac
cagaggcttatcgcggggcttggcaatatctatgtctgcgaggcgctctggcgcgcaggg
ctttcgccgatgcgcgcggcaggctcggttgcaggcgaaatggacgtgatggagcggctt
gccggggccattcgctccgtcattgcgcaggcgattgcagccggaggctccagccttaag
gattacattcaggccgacggtgcgctcggctatttccagcactctttttccgtctatggc
cgcgagggtaagccatgcagaaaccccgcctgcggcggcactgtcgagcgcgtggtgcaa
tctggtcgttcgacttttttctgtgcctcttgccagacatga
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