Bacillus cereus FT9: BcrFT9_02958
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Entry
BcrFT9_02958 CDS
T03417
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcef
Bacillus cereus FT9
Brite
KEGG Orthology (KO) [BR:
bcef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcef03032
]
BcrFT9_02958
03400 DNA repair and recombination proteins [BR:
bcef03400
]
BcrFT9_02958
Enzymes [BR:
bcef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BcrFT9_02958
DNA replication proteins [BR:
bcef03032
]
Prokaryotic type
DNA Topoisomerases
BcrFT9_02958
DNA repair and recombination proteins [BR:
bcef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BcrFT9_02958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
SAND
Toprim_3
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AIE80497
LinkDB
All DBs
Position
complement(3623259..3625337)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPSKAKTIEKYLGKKYKVVASMGHVRDLPKSQMGIEVKNNFTPKYITIRGK
GPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVDVESDCRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIERER
EIQSFEPEEFWTIKTEFVKGKDTFEASFYGVDGEKVQLTNETQVNEIIEQLKDNAFSVEN
VTRKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQLYEGIDLGKQGTVGLITYMR
TDSTRISETAQTEARTYITEAFGTEYIGTEKKKETKKSNAQDAHEAIRPTSVMRKPEELK
SFLSRDQLRLYKLIWERFVASQMASAIMDTVTARLINNNVQFRASGSVVKFPGFMKVYVE
SKDDGAEEKDKMLPPLEVGETVFSKDLEPKQHFTQPPPRYTEARLVRTLEELGIGRPSTY
VPTLETIQKRGYVGLDNKRFVPTELGEIVIELILEFFPEIINIEFTANMEQSLDEVEEGN
ANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCELCNHPMVFKMGKYGKFMACS
NFPDCRNTKPIVKEIGVTCPKCDKGQIIERRSNKKKRLFYGCGTYPECDFVSWDKPIGRK
CPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacctcgtaatcgtggagtcgccttctaaggcgaagaccattgagaaatat
ttagggaaaaaatacaaagttgtcgcgtctatgggacacgttcgcgatttacctaaaagc
caaatggggatagaagtaaagaacaacttcaccccgaagtatattaccattcgtggtaaa
ggtcccgtcttaaaagacttaaaatcagcggcaaaaaaagcaaagaaagtctatctcgcg
gccgatccagaccgcgaaggggaagctattgcttggcatttagccaatacgttaaatgtg
gacgttgaatcagattgccgagttgtgtttaatgagattacaaaagatgcaataaaagaa
tcattcaaacatcctcgtgcgattaacatggatttagtagatgcacaacaagcaagacgt
atactagatcgtcttgttggttacaatattagtcctttattatggaagaaagtaaaaaaa
ggattaagtgcaggacgcgtacaatctgtagcagttcgtttaattatcgaacgtgaaaga
gaaattcaaagttttgagcctgaagaattctggacaattaagacagaatttgtgaaaggg
aaagacacatttgaagcaagcttttacggtgtagatggtgaaaaagttcaattaacgaat
gaaacacaagtgaatgaaataattgaacagctgaaagataatgcgttctcagttgaaaat
gtaacgcgaaaagagcgaaaacgtaatcctgcattaccatttacaacatcttccttgcaa
caagaggcagcgcgtaagttaaacatgcgagcaaagaaaacgatgatgcttgcgcagcaa
ttgtatgaagggatcgatcttggaaaacaaggaactgtaggtcttattacgtatatgaga
actgattcaacgcgtatctcagaaacagctcaaacagaggcacgtacttacattactgag
gcgtttggtacggaatacataggaacagaaaagaagaaagaaacgaagaagtcgaacgca
caagatgcgcatgaggcaattcgtcctacttcggtaatgagaaagccagaggaactaaag
agtttcttaagtcgtgatcaacttcgattgtataaattgatttgggagcgatttgttgca
agtcaaatggcgtctgctataatggatactgtgacagcgagactcattaataataatgtt
cagttccgtgcaagtggatcggttgtaaagttcccaggatttatgaaagtgtatgtagag
tcaaaagatgacggggctgaagaaaaggataagatgttgccacctttagaagtaggggaa
accgtattttctaaggatttagaaccgaagcaacactttacacaaccaccgccgcgctat
actgaggctcgtctagtaagaacacttgaagagcttggaattggaagaccgtcgacttac
gtaccgacacttgaaacgattcaaaaacgtggatatgtaggtttggataataaacgcttc
gttccaactgaacttggtgaaatagtaattgaacttattttagagtttttcccagaaatt
attaacattgaattcactgctaacatggagcaaagcctcgatgaagtagaagaaggaaat
gcgaattgggtaaaaattgtggatgatttctacgtaggatttgaaccgcgtttagaaaaa
gcggaaaaagaaatgcgtgaagtagaaattaaagatgaaccagctggggaagactgtgaa
ttatgtaatcacccaatggtctttaaaatgggtaaatacgggaaatttatggcttgctcg
aatttcccagattgtcgtaatacaaaaccgattgtgaaagaaatcggtgttacttgtccg
aaatgtgataaaggtcaaattattgaacgtcgtagtaataaaaagaaacgtcttttctat
gggtgcggtacgtatccagagtgtgactttgtatcttgggataagccgattggccgtaaa
tgtccgaagtgtgaaggtatgctagtagagaagaagttgaaaaaaggcgtacaagtacaa
tgtatttcgtgtgattatgaagaagaacaacaaatgtga
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