Bacillus cereus FT9: BcrFT9_03470
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Entry
BcrFT9_03470 CDS
T03417
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcef
Bacillus cereus FT9
Pathway
bcef03410
Base excision repair
bcef03430
Mismatch repair
bcef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BcrFT9_03470
03430 Mismatch repair
BcrFT9_03470
03440 Homologous recombination
BcrFT9_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcef03400
]
BcrFT9_03470
DNA repair and recombination proteins [BR:
bcef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BcrFT9_03470
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BcrFT9_03470
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BcrFT9_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AIE81005
LinkDB
All DBs
Position
complement(4162363..4164702)
Genome browser
AA seq
779 aa
AA seq
DB search
MLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDP
FLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFT
EGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEAL
AIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLL
SEDPEEAKELAEEIDELNKLRKDIVKKITEEAIAEVETNFPPEDNKVLVLAKEGWNPGVI
GIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA
GMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV
IGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANVAELPKEKIKMVYFSEEVL
HKFSLEDYKEYMMHASEVTELDDQYIVFLDLPKGTNELRELFKVGFPSRIYTLFYQENNH
LFSTVPTREHFKWYYSFLSQKSPFSLRQYGEQLCQHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaaccgaagacgcgttggaaagaaaaagaatataatggcgagcgagtgagtgaa
ttagcaagtaaattacaattatcaccacttgtcgtttcgttattcctcggtagaggacta
gatacagaagataaaattttagattttttaaatacagaaaatcaagaatttcatgatcca
tttttattagaaggaatggatagaacggtagaacgtgtaaataaggcgattcaaaatgga
gagcaaatattaatatttggtgactacgatgcggacggagtaagtagtacgactgtgtta
tatcttgccttgcaagaattaggtgcagatgtagaattttatatcccaaaccgttttaca
gaaggttatggaccaaacgaagaagcatttcgttgggcgcatagcgcaggattctcatta
attattactgtcgatactggtatcgcagctgtacatgaagcgaaagtagcgaaggaactt
gggatagatctaattattacagatcaccatgagccgccaccagaattgccagaagcactt
gcgattattcacccgaaattagatggcggtgtgtatccgtttcactatttagcgggcgtt
ggtgttgcgtttaaagttgcgcatgcactactgggccgtgtaccagaacatttattagaa
attgcagtaattggtacagtggctgatttagtatcacttcatggtgagaatagattgcta
gtgaagcgcggtttaaaacatatgcgcatgacgaaaaatatcggactaaaggcgctattt
aaagttgctaacgtttcgcaaagtgaaattacagaagagagtattggcttctcaatcgca
cctcgtattaatgcagttggacgtttagaagatgctacgccggctgtacatcttttatta
tcagaggatccggaagaagcgaaagagttggctgaagaaattgatgagctgaacaaactg
cgaaaagatattgtaaagaaaattacagaagaagcgatcgccgaagtggaaacgaatttc
ccgcctgaagacaataaagtattagtgcttgcaaaagaaggatggaatccaggtgtaatt
ggaattgtcgcttctaaattagttgaacgtttttatcgtccgacgattgtattatgcatt
gatcctgtaaaagaaactgcaaaaggttcagcgcgtagtatagcgggattcgatttgttt
gcaaacttgtcagattgtagagagttattgccacacttcggaggacatccgatggcagcg
ggaatgacgctacatatgaatgatgtagatgaattacgtcgccgtttaaatgagcaagca
gaggtaattttaacagaagaagattttattccaattacagctgtcgatgctttttgtaaa
gtggaggacgtaacacttgcagcaattgaagatatgcaaaagttagcgccatttggtgtt
gggaatccaaagccacgtattgcggtgaaggatgcagagttagaaagtattcgtgcaatt
ggatcagacggttcacatttaaaaatggctcttcgtgatggacaagcaacactggataca
attggatttggatttggtgcgtatgcgaaagaaatttctccagttgcaaaagtatctgta
attggggaagcgtctattaatgaatggaataattttaagaagccacaactaatggtacaa
gatattgctgtagaggcatggcaattatttgattggcgcagtatgcgtaacgtagaagca
aatgtagcagaacttccgaaagaaaaaataaagatggtgtatttttctgaagaggtattg
cataaattttctttagaagactataaagagtatatgatgcatgcatcagaagtaacagaa
ttagatgatcaatacatcgtgttccttgatttaccaaaaggaacaaatgaattacgagag
ttatttaaagtagggttcccgtcgcgaatctatacactattttatcaagagaataatcat
ttatttagtactgttccaacgagagaacactttaaatggtattattcgttcttgagccaa
aaatcaccattttctttaagacaatatggagaacaactatgtcaacataaaggttggtca
aaagatacagtaaatttcatgacacaggtgttttttgagttagaatttgttacaataaaa
gatggcgtcatttttatggcagacaaaaaacaaaagcgtgatttaattgaatcgaacaca
tatcgtgagaaaatgaaccacttacaattagaaaaagaattggtttatagcacatatcag
caactatatacatggtttgaaacgattcgtaatcataaagaagtagaacagttagggtaa
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integrated database retrieval system
