Bacillus cereus FT9: BcrFT9_03560
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Entry
BcrFT9_03560 CDS
T03417
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcef
Bacillus cereus FT9
Pathway
bcef03410
Base excision repair
bcef03430
Mismatch repair
bcef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BcrFT9_03560
03430 Mismatch repair
BcrFT9_03560
03440 Homologous recombination
BcrFT9_03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcef03400
]
BcrFT9_03560
DNA repair and recombination proteins [BR:
bcef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BcrFT9_03560
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BcrFT9_03560
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BcrFT9_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AIE81093
LinkDB
All DBs
Position
4273783..4275444
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AA seq
553 aa
AA seq
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MHWKQLDIPFENHPHCANMLYLAKHVNIHPLLGYHLFVHGIQTEEQLWSFLYPDPSQFHN
PFLLNDMNRAVDRILKAIQQREIIYIFGDYDCDGITSSTILKQALEKLGAHVISCLPLRE
DGYGLTPLAVDALPQNVSLLITVDNGSSAHPAMKRAKEKGIDVIVTDHHEVLGEHPSCLA
FVNPKRKDNTYPYPHLCGAGVALKLIQALFMTLKQDWIKETWNYIEYATIGTIADVMPLT
GENRAICWFGLYKMRNCPNKLFQLFREQLQLKYIDSTNIGFLIGPMLNSCGRISDPNIGA
AILQKATPTAEDVQLLMNLNNKRKQLTNKQFKLAAEIIEQQSLEKDSLLVVQGDFHKGII
GILASKISSHYKRPTIVLTQDGVGSARSGNGSKFSIIQAIQSCSELLKKFGGHDAAAGLS
IAPEESHIQQFRECMQEAAQQQNTSQPTSYFISEFPIYNFPNHLFDDLMALEPYGNGHPK
PSFRSKNIFACGHSCFGKNKEHVEFFFSKKRAFAYSHGHLFQNWNRYNRMDVLYTPHSYE
KQDFLINDLQLIQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcattggaaacaacttgatattccatttgaaaatcatccgcactgtgcgaacatgctg
tacctagcaaaacatgtaaacatccatcctttactcggttatcacttgtttgtccatggt
attcaaaccgaagaacaattatggtcgttcttatatcctgatccttcacaattccacaat
ccctttctactcaatgatatgaatcgagcagtcgatcgtattttaaaggctattcaacaa
agagaaataatttatatctttggggattatgactgtgatggcattacttcctcaacaatt
ttaaaacaagcactagaaaagctcggtgcacatgtaatatcatgtcttcctttacgagaa
gatggatatggactaacaccacttgccgtggatgctcttccccaaaatgttagtttacta
attaccgttgacaacggctccagtgcacatccagctatgaaacgagcaaaagaaaaagga
attgatgtgattgttacagatcaccatgaagtattaggagaacatccaagttgtttagct
tttgtgaatcctaaacgaaaagataatacatatccatatccgcatttgtgcggtgctggt
gttgcattaaaattaatacaggcactttttatgacattaaagcaagattggataaaagaa
acatggaactatattgagtatgcaacaataggaacaattgccgatgtcatgccactaact
ggagaaaatagagctatttgttggtttggtctctataaaatgcgaaattgcccaaataag
ctttttcagttatttcgtgaacaattacaactcaaatatattgatagcactaatattgga
tttctcattggacccatgctgaactcctgcggacggatatctgaccctaatatcggagca
gctatcctccaaaaagcaacaccaacagcagaagatgttcaacttcttatgaatttaaat
aacaagcgtaagcaattaactaacaagcagttcaaattagcagccgaaatcattgaacaa
caatcattagaaaaagattcattactcgttgtacaaggagattttcacaaagggattatt
ggcatactagcttctaaaatttctagccattataaaaggcccacaattgtactcacccaa
gatggagtaggctctgcaagaagtggaaatggaagcaagttttcaattatacaagctatt
caatcttgcagtgaactattaaaaaaatttggaggacatgatgctgcggctggattatct
attgctccagaagaatcacacatccaacagtttagagaatgtatgcaagaagcagctcaa
cagcaaaatacgtcccaaccaacttcatattttataagcgaattcccaatctataacttt
ccaaatcatttatttgatgatttgatggcactggaaccatatggaaatggtcatccaaaa
ccttcttttcgaagcaaaaacatatttgcatgtggacactcctgctttgggaaaaataaa
gaacacgttgaattctttttttcaaaaaagcgagcctttgcttattcgcatggtcactta
tttcaaaactggaatcgatataatcggatggatgttttatatacaccccattcttacgaa
aaacaagattttcttatcaatgatcttcaattaattcaataa
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