Bacteroides cellulosilyticus: BcellWH2_00475
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Entry
BcellWH2_00475 CDS
T04116
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bcel
Bacteroides cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
bcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcel03009
]
BcellWH2_00475 (rlmCD)
Enzymes [BR:
bcel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BcellWH2_00475 (rlmCD)
Ribosome biogenesis [BR:
bcel03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BcellWH2_00475 (rlmCD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
PabTrmU54_TRAM_dom
TRAM
N6_N4_Mtase
Cons_hypoth95
UPF0020
Methyltransf_11
PrmA
Methyltransf_ANTKMT
Methyltransf_37
PCMT
AAA_SelU
Motif
Other DBs
NCBI-ProteinID:
ALJ57743
LinkDB
All DBs
Position
467065..468441
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AA seq
458 aa
AA seq
DB search
MAAEGKAIAKVNDLVIFVPYVVPGDVVDLQIKRKKHHYAEAVAVKFHEYSRERAVPFCQH
YGVCGGCKWQVLPYSEQIKYKQKQVTDNLTRIGKIELPEISPILGSEKTQFYRNKLEYTF
SNKRWLTEEEIKQNVVYEQMNAVGFHIPNAFDKVLAIEKCWLQDDISNRIRNTVRDYAYE
HNYSFINLRTQEGMLRNMIIRTSTTGELMVILIAKIEEEVEELRLFKQLLQYVADTFPEI
TSLLYIINNKRNDTITDLDVYTFKGKDHIFEEMEGLRFKIGPKSFYQTNSEQAYNLYKIA
RNFAGLTGKELVYDLYTGTGTIANFVSKQARQVIGIEYVPEAIEDAKVNAEINGIKNTLF
FAGDMKDMLTQDFINQYGRPDVIITDPPRAGMHQDVVDVILFAEPKRIVYVSCNPATQAR
DLQLLDVKYKVKAIQPVDMFPHTHHVENVVLLELRNED
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccgaaggaaaagccatcgcaaaggttaatgatttggttattttcgtaccttat
gtcgttcccggagatgtagtagacctgcaaattaagagaaaaaagcatcattatgctgaa
gctgtagcagtgaagttccacgaatattctcgtgaaagagctgtcccattttgccaacat
tatggcgtatgtggcggttgcaaatggcaagttcttccctattctgagcaaatcaagtac
aagcaaaaacaagtaacggacaaccttacccgcatcggaaaaatcgaacttccggaaatt
tctccgatcctcggttccgagaaaacacaattctacagaaataaactggagtacactttt
tctaacaaacgttggttgacggaagaagaaataaaacagaatgtggtatacgaacagatg
aatgccgtaggtttccatatccccaacgctttcgataaagtactggctatagagaagtgc
tggttgcaagatgacatatccaaccgtatccgcaataccgtacgtgattatgcttacgaa
cacaattattctttcatcaacctccgcacgcaggaaggcatgttgcgcaacatgatcatc
cgcacatctaccaccggagaattaatggttatcctcatagctaaaatagaagaagaggta
gaagaattgagattattcaagcaactcctgcaatatgtagcagatacattccctgaaatc
acctctctcctatacattattaataataaacgtaatgataccattaccgacctggatgta
tacactttcaaggggaaagatcacatcttcgaagagatggaaggattacgcttcaaaata
ggtcctaaatcattctatcaaacaaactccgaacaagcatacaatctttataagatagca
cgcaacttcgccggactgaccggtaaagagttggtttacgacctttatacaggcacagga
accattgccaactttgtttccaaacaagcccgccaggttattggtattgaatatgtaccc
gaagctatcgaagatgcaaaggtaaatgcagaaatcaacgggattaagaatacattattc
tttgccggtgatatgaaagacatgctgactcaggatttcatcaatcaatatgggcgtccg
gatgttatcattaccgatcctccacgtgcaggaatgcatcaggatgtggtagatgttatc
ctgtttgccgaaccgaaacgtatcgtatatgtaagctgcaatcctgccacacaggcacgc
gacctgcaactgctcgacgtaaaatataaagtaaaagccatacaaccggtagatatgttc
ccccacacccaccacgtagaaaacgtagtgcttctggaattaagaaatgaagactga
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