Bacteroides cellulosilyticus: BcellWH2_01903
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Entry
BcellWH2_01903 CDS
T04116
Symbol
recQ_3
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcel
Bacteroides cellulosilyticus
Pathway
bcel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BcellWH2_01903 (recQ_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcel03019
]
BcellWH2_01903 (recQ_3)
03400 DNA repair and recombination proteins [BR:
bcel03400
]
BcellWH2_01903 (recQ_3)
Enzymes [BR:
bcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BcellWH2_01903 (recQ_3)
Messenger RNA biogenesis [BR:
bcel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BcellWH2_01903 (recQ_3)
DNA repair and recombination proteins [BR:
bcel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BcellWH2_01903 (recQ_3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
HTH_40
LIP1_C
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ALJ59154
LinkDB
All DBs
Position
complement(2237197..2239380)
Genome browser
AA seq
727 aa
AA seq
DB search
MAGKKINLTDQLKKYFGFDTFKGNQEAIIQNLLAGNDTFVLMPTGGGKSLCYQLPSLMME
GTGIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSLNKGAIDQVKSDILSGKTKLLYVA
PESLTKEENVEFLKTVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTA
TATPKVQHDIQKNLGMIDAEVFKSSFNRPNLYYEVRPKTNNIDRDIIKFIKNNSEKSGII
YCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGID
KPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE
IGKQLLLETAAYAESSVCRRKTLLHYFGEEYMEENCGNCDNCLNPKKQVEAQELLCTVIE
AILAVKENFKADYIIDIIQGRETTEVQAHLHEDLEAFGSGMGEEDRTWNAVIRQALIAGY
LSKDVENYGLLKVTDEGKKFLKHPKSFKITEDNDFEEVEEEAPARGGGSCAVDPALYSML
KDLRKKLSKKLEVPPYVIFQDPSLEAMATIYPVTLDELQNIPGVGAGKAKRYGEEFCKLI
KRHCEENEIERPEDLRVRTVANKSKMKVAIIQAVDRKVALDDIALSKGIEFGDLLDEIEA
IVYSGTKLNIDYFLDEIMDEDHMLDIYDYFKESTTDKIDDALDELGDDFTEEEVRLVRIK
FISEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaagaagattaatttgacagaccagctgaagaagtacttcggatttgacaca
tttaaaggaaatcaggaggctatcatacaaaatctgttggcaggtaacgatacattcgta
ctgatgcctacaggtggaggaaaatcactatgctaccagttaccgtcattaatgatggaa
ggtacaggtattgtgatttctccgttgattgccttaatgaagaaccaagtcgatgcgatg
cgtaacttcagtgaagaagatggtattgcccattttatcaactcttctcttaataaaggt
gcgatagatcaggtgaagtctgacatcctcagcggtaagacaaagttactgtatgtagct
cccgaatcgctgacgaaagaggaaaatgtagagtttctgaagacagtgaagatttccttc
tatgctgtagacgaagcccactgtatctctgaatggggacatgacttccgtccggaatat
cgccgtatccgccctattatcaatgaaatcggaaaagcaccggtgattgctctgactgcg
actgcgacccctaaagtgcaacatgatatccagaagaatctgggtatgattgatgccgaa
gtgttcaagtcgtcgttcaatcgtccgaacctctattatgaggtacgtcccaagaccaat
aacatagatagagatatcatcaagttcatcaagaataattcggaaaagtcgggcattatt
tattgcctgagtcggaaaaaggtagaggaacttgctgagattctacaggcgaatggtatc
aatgcccgcgcataccatgcaggaatggattctgcaacacgcacgcaaaatcaagacgac
ttcttgatggagaaaatagatgtgattgtagctaccattgcttttggtatgggtattgac
aagcctgatgtgcgttatgttattcattatgatatcccgaaaagtctggaaggatattat
caggaaacaggacgtgccggaagagatggaggcgaaggacagtgtattaccttttatacc
aataaagacttgcagaaacttgaaaagttcatgcaaggtaaacctgtggcagagcaggaa
atcggtaaacagcttctgctggaaaccgctgcttatgccgaatcttccgtatgtcgccga
aagacgctgttgcattacttcggtgaagagtatatggaagagaactgtggaaattgtgac
aactgtttaaacccgaaaaaacaagtggaggctcaagaattattgtgtaccgtgatagag
gctattctcgcggtgaaagaaaattttaaggcagattatatcatcgacattatacaagga
cgtgaaactaccgaagtgcaggcgcatctgcatgaagacctggaagctttcggctccggt
atgggagaagaagacagaacatggaatgctgtcattcgccaagcgctcattgctggttac
ctgagtaaagatgtggaaaattacggtttgctgaaagtaacggatgaaggaaagaagttc
ctgaaacatcctaaatcgttcaagataaccgaagataatgattttgaagaagtggaagaa
gaagctccggcaaggggcggtggctcttgcgctgtcgatccggctctttattccatgctg
aaggatttgcgtaagaagctttccaagaaactggaagtaccgccttatgtaattttccag
gatccttcattggaagccatggcaaccatttatccggtgacactggatgaattgcaaaac
attcccggtgtaggtgcaggtaaggctaaacgctacggtgaggagttttgcaagctgata
aagcgtcactgtgaagagaatgaaatcgaacgccctgaagacttacgtgttcgtacggtt
gctaataaatccaagatgaaagtggctattattcaggctgtagaccgtaaggtggcattg
gatgatatcgcactttccaaaggcattgagtttggtgatttattggacgaaatcgaggca
atcgtttattctggtacaaagttgaatattgattacttcctggatgagattatggacgaa
gaccacatgttggatatctatgattatttcaaggaatctactactgacaagatagatgac
gcacttgatgaactgggtgatgatttcacggaagaagaagtaaggttggttcgcattaag
tttatttctgagatggcgaattaa
DBGET
integrated database retrieval system
