Bacteroides cellulosilyticus: BcellWH2_02589
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Entry
BcellWH2_02589 CDS
T04116
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bcel
Bacteroides cellulosilyticus
Pathway
bcel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BcellWH2_02589 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcel03019
]
BcellWH2_02589 (cshA)
03009 Ribosome biogenesis [BR:
bcel03009
]
BcellWH2_02589 (cshA)
Enzymes [BR:
bcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BcellWH2_02589 (cshA)
Messenger RNA biogenesis [BR:
bcel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BcellWH2_02589 (cshA)
Ribosome biogenesis [BR:
bcel03009
]
Prokaryotic type
rRNA helicases
BcellWH2_02589 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Ig_Tie2_1
Motif
Other DBs
NCBI-ProteinID:
ALJ59828
UniProt:
A0A0P0GIJ6
LinkDB
All DBs
Position
3197549..3199555
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AA seq
668 aa
AA seq
DB search
MCPNIKIYKDLMKNFEELGLSPEIRRAIEEMGYECPMPVQEEVIPYLLGENNDVVALAQT
GTGKTAAFGLPLIQKINVKNRIPQSLILCPTRELCLQIAGDLNDYSKYITGLRVLPVYGG
SSIDSQIRALKQGVHIIVATPGRLLDLMERKTVSLTTIQNVVMDEADEMLNMGFTDSINA
ILADVPQERNTLLFSATMSPEIARISKKYLRDAKEITIGRKNESTSNVKHVVFTVHAKDK
YAALKRIVDYYPQIYGIIFCRTRKETQEIADKLMQDGYNADSLHGELSQAQRDTVMQKFR
IRNLQILVATDVAARGLDVDDLTHVINYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLR
EKGKMREIERIISKKFIVGEMPTGKQICEKQLLKVIDDLEKVKVNEEDMADFMPEIYRKL
DWLSKEDLIKRMVSHEFNRFSEYYRNREEIEMPTDSRGERNSRGGSERTGDRSSRKADPG
FTRLFINLGKMDNFFPNELIGLLNGNTRGRVELGRIDLMKNFSFFEVDEKEAGNVVKALN
RANWNGRKVSVEIAGEEGKEAPKGRRKSEGNNYGKKEFEGKKRSFKDEKRSDASGKRSDA
PRKSRSKSESAPADKKKSKPSREERGYTDARGKKDDWRQFFQGDNKEFRDKEPDFSEEGW
ARRAPKKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcccgaatataaagatatacaaagatttaatgaagaattttgaagagctcggtctg
tcgccggagatacgccgcgccattgaagaaatgggatatgagtgtcccatgccggtacaa
gaggaagtgattccttaccttttaggagaaaataatgatgttgtagcacttgcacaaaca
ggaacggggaaaaccgccgcattcggcttaccacttatccagaaaattaatgtaaagaac
cggattccacaatcccttatactttgccctacacgcgaactttgcttgcagattgcaggt
gatctgaatgattattccaaatacatcaccggattgagggtattgcctgtatatggtggt
tcatccatagacagccagatacgcgccctgaaacagggtgtacatatcattgtcgccacc
ccgggacgcttgctcgacctgatggagcgcaaaacggtatccctcaccaccatccagaac
gtagtgatggacgaggcggacgaaatgctgaacatgggattcacggacagcatcaacgcc
attcttgccgatgtaccgcaagagcgtaacaccctgttattctccgccactatgagcccg
gaaattgcacgcatttcaaagaagtatctgcgtgacgccaaagaaatcaccatcggacgg
aaaaatgaaagcacaagcaatgtgaagcatgtggttttcaccgttcatgccaaagataaa
tacgctgccctgaaacgcatcgtagactattacccgcaaatatatggtatcattttctgc
cgtacacgaaaagaaacgcaggagattgccgacaagctgatgcaggacggttataacgct
gactcactgcacggagaattaagccaggcacaacgtgataccgtcatgcagaaattccgt
atccgcaacctgcaaatcctggttgccacggacgttgccgcccgcggactggatgtggac
gatctgacccacgtcatcaattatggcttgccggatgataccgaaagctacactcaccgt
agcggacgtacaggacgtgccggaaagacaggtacttccatcgccatcatcaacctgcgc
gagaaaggtaaaatgcgtgaaatcgaacggattatcagcaagaagtttattgttggtgaa
atgcctaccggtaaacagatttgcgagaaacagctgctgaaagtaatcgatgacctggaa
aaggtgaaggtgaatgaggaagatatggctgatttcatgcctgaaatataccgtaaactg
gactggttgagcaaagaagacctgatcaagcgtatggtttctcatgaattcaaccgcttc
tcagaatattaccgcaatcgcgaagaaatagaaatgcctaccgacagccgtggtgaacgc
aacagcagaggcggcagcgaacgcaccggtgatcgcagcagccgcaaagcagatccggga
ttcacccgactgttcatcaatctgggtaagatggataatttcttcccaaatgagctgata
ggcctactgaacggtaatacccgcggacgcgtggaactgggacgcattgacctgatgaag
aacttctcattcttcgaagtagatgagaaagaggcaggtaatgtagtgaaagccctgaac
cgtgcgaactggaacggccgaaaggtatctgtagaaattgccggcgaagaaggcaaggaa
gctcccaaaggcagacgtaagagtgagggcaacaactacggcaagaaggaatttgaaggc
aagaaacgcagcttcaaagacgaaaagcgtagtgatgcatctggaaaacgtagcgatgcc
cccagaaaaagtagaagtaaatctgaaagtgctccggctgacaaaaagaaaagcaaacca
agccgcgaagagcgtggctataccgacgcccgcggcaagaaagacgattggagacagttc
tttcaaggtgacaacaaggagtttcgtgataaagagcccgatttcagcgaagaaggctgg
gcaagacgggcacctaagaagaaatga
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