Bacteroides cellulosilyticus: BcellWH2_03248
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Entry
BcellWH2_03248 CDS
T04116
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bcel
Bacteroides cellulosilyticus
Pathway
bcel02020
Two-component system
bcel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BcellWH2_03248 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BcellWH2_03248 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcel03021
]
BcellWH2_03248 (rpoN)
Transcription machinery [BR:
bcel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BcellWH2_03248 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
DUF7090
LacI
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ALJ60482
UniProt:
A0A0P0GHH6
LinkDB
All DBs
Position
complement(4202150..4203640)
Genome browser
AA seq
496 aa
AA seq
DB search
MAQGSRQVQTQAQQQVQTLSPQQILVVKLLELPAVELEDRIHAELLENPALEEGKEDTAS
DDFSENSDTEGSAEDSGANEYDSLSDYLSEDDIPDYKLQENNRSKGEQAEEIPFSDATSF
YETLKEQLSERDLTEHQRELAEYLIGSLDDDGLLRKSLDSICDELAIYAGIECTQEELEE
ALKIIQDFDPAGLGARNLQECLLIQIHRKIEQQHFTPNPLLYIEEAIISECYEEFTRKHW
DKIQQKLGLEEDAFEQAIKEICKLNPRPGASLGEAIGRNMQQIIPDFIVDTYDDGTINLA
LNNRNVPELRMSRDFTEMVEEHTKNRANQSKESKEAMMFLKQKMDAAQGFIDAVKQRQNT
LMTTMQAIIDLQRPFFLEGDESLLRPMILKDVAERTGLDISTISRVSNSKYVQTNYGIYS
LKFFFSDGYVTEDGEEMSVREIRKILKECIDNEDKKKPYTDDELTDILKEKGYPIARRTV
AKYRQQLNIPVARLRK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttccagacaagtacaaactcaagcgcagcaacaggtacagacactgtcg
ccccagcagattctggtagtgaagctattggaattgcccgctgtagaactggaagaccgt
atacatgcggaacttctggaaaatccggctctggaagaaggaaaggaagatacggcaagt
gacgacttttctgaaaattccgatacggaaggttccgcagaagacagcggagccaatgaa
tatgattcattaagcgactatttgagcgaagacgatatccccgactacaaattgcaggaa
aacaaccgtagcaaaggtgaacaggccgaagaaatacctttctccgacgccacttctttt
tacgaaaccctaaaggagcaactaagcgaacgtgacctgaccgagcatcagcgtgaactg
gcggaatatctgatcggatcattagatgacgacggcctgttacgtaagtctctggatagc
atctgtgatgaactcgccatctacgccggcatcgaatgcacccaggaagaattggaagag
gcactgaagatcatccaggactttgatcccgccggactcggtgcacgcaacctgcaagaa
tgcctgctcattcagattcatcgcaagatagagcaacagcacttcaccccgaaccctcta
ctttatatagaagaagcgatcatctccgaatgttacgaagaatttacccgtaagcattgg
gacaagatacagcagaagctcggattggaagaagatgcttttgaacaggctatcaaagag
atctgcaaactcaatccgcgtccgggtgcctctctgggtgaagccatcggccggaacatg
caacagatcatccccgacttcattgtagatacatacgacgacggtaccatcaatctggct
ctgaacaaccgaaacgttccggaactgcgtatgagccgtgatttcaccgagatggtggaa
gagcataccaaaaacagggctaaccagtcgaaagagtcgaaagaagccatgatgttcctg
aagcagaagatggatgcagcacaaggctttattgatgccgtgaagcaacgccagaataca
ttaatgactaccatgcaagccattatcgacctgcaacgcccgttcttcctcgaaggagac
gaatcattgttgcgccctatgatattgaaggatgttgccgaacgtaccggattagacatt
tcaaccatctcccgcgtcagcaacagcaaatatgtgcaaaccaactatggcatctattca
ctgaaattcttcttcagtgatggatacgtcaccgaagacggtgaggaaatgtctgtacgt
gagattcgtaagatattgaaagaatgcattgacaatgaagataaaaagaaaccttataca
gatgatgaactgacggatatactgaaagaaaaaggatatcctatagcacgccgcacggta
gccaagtacaggcaacagttgaacataccggtggcaagactgaggaagtaa
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