| Entry |
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| Symbol |
recQ_5
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
bcel Bacteroides cellulosilyticus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bcel00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BcellWH2_04663 (recQ_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bcel03019]
BcellWH2_04663 (recQ_5)
03400 DNA repair and recombination proteins [BR:bcel03400]
BcellWH2_04663 (recQ_5)
Enzymes [BR:bcel01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BcellWH2_04663 (recQ_5)
Messenger RNA biogenesis [BR:bcel03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BcellWH2_04663 (recQ_5)
DNA repair and recombination proteins [BR:bcel03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BcellWH2_04663 (recQ_5)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(6000931..6005805)
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| AA seq |
1624 aa
MSIWSKLIGIKKTEDRNNIIGNKTTSVPCSTHNYAIVDVEIGLKDHKIHDIGALKHDDTT
FHKTSKEELFIFLNNVDYICGHNIVHHDAKYLFTDKICRWILVDTLYVSPLLFPEHPYHR
LVKDDKLISEQMNNPVNDCKKAKDLLKDEIACWYSLPKEKRIIFTSLLKNKKEFEGFLSM
VSAEHIHKGIPGLIKEFYAGKICQHADLDMLINQYPCGLAYALALIDTTDYRSVTPGWVL
YNYPEVEFIVKLLRHTACKEGCNYCHTQLDVLHNLKTFFGYEHFRTYEGEPLQERAAQAA
VKGKSLLAIFPTGGGKSLTFQLPALMAGHSVHGLTVVISPLQSLMKDQVDNLADRGITDA
VTINGMLDPITRSLSIQRVQDGEASLLYISPEMLRSKTIEKILMARHLVRFVIDEAHCFS
SWGQDFRVDYLYIGKFIQKYQQKKKCKTPIPVSCFTATAKQKVIQDICDYFKQTLNLNLE
LFASTASRTNLHYSVIHVENDNDKYLKLRELVAETNCPTIVYASRTKRTKELAAKLTRDG
YKALPFNGKMEADEKIANQDAFMNDQVHIIVATSAFGMGVDKKDVGLVVHYDISDSLENY
VQEAGRAGRDPGLSARCYVLYSDNDLDKHFILLNQTKLSISEIQQVWKAVKGLTKHRMKV
NCSALEIARQAGWDDSVSDIETRVRTALAALEQSGYLVRGNNAPHVYATGITVKNMDEAR
ERISASLLFGSDEIEKAVRIIKSLISQKHIAKAQDSEAESRIDYLADILGLSKRDVISVV
ERMRQEGILADSKDISAYLQDAGDSERKSQMLLERFAKLEQYILNHIPDESLRISYKQLN
ENAVNDGINTSKEKDIRTLLYFLTVKGYTRKKEDAVRNMEISRQADLESTIRRFEKRLEI
SRFAVEWLYKLAFDAEKKNVPDKAIQFSVVELLNRIKSSSQSLFGGLDDIQLEDVEEALL
YLSKIGALKLEGGFLVLYNAMNIQRIKDNKSRYKQDDYRMLNEFYRLKIQQVHIVGEYAN
LMVKNYHAALQYVQDYFQMDYRKFVTKYFKGDRTSEIQRNLTPQKYNQLFGQLSKRQMEI
ISDKDSRCIVVAAGPGSGKTRVLVHKLASLLLLEDVKHEQLLMLTFSRAAATEFKQRLME
LIGNAAHFVEIKTFHSYCFDLLGRIGNLEDSKNVVSKAAEMICQGEVEPNKIGKTVLVID
EAQDMGTEEHSLVKALITNNEEMRVIAVGDDDQNIYEFRGSDSGYMYRLAQESGSTFVEM
TENYRSARQPVDFANGFLKTINKRIKSTPIISMRKEKGWVEVIRHHSTYMYQPLVENLLQ
HKDKGTSCVLTQTNEEAVILIALLRKHGINSKLVQSMDGLRFWNMAEMRYFLRHIDKRIK
TPLITEELWEEAKHATFSIYDRSLTLTYVKRCVEQFEQTNKTKYFSDFKEFVFESSVEDF
CDTSGTDVVVSTIHKAKGREFDDVYMLISDNYAKDAHLMRRYYVGITRAKNRLFIHTNGD
CFNHLSANLYLIDQQHYDMPEEIILQLSHKDVNLGFFKERKQEVLALRGGDSLIYNDFFL
YSSSTDKPIAKLSSRMQGTLSEWEQRGYKVQSASVRFVLAWKPKDAPKDETETAVLLADL
RLSL |
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| NT seq |
4875 nt +upstreamnt +downstreamnt
atgtcaatatggagtaaactcataggaatcaagaaaaccgaagatagaaacaatatcatc
ggcaataaaacaacctctgtaccatgtagtacccacaattatgccattgtagatgttgaa
ataggcttgaaagaccataaaatccatgacataggagcactcaaacatgatgacacgaca
tttcataaaacctcaaaagaagaactatttattttcttaaacaacgtggactacatctgc
ggacacaatatcgttcaccatgacgccaaatacctgtttacagacaaaatatgccgctgg
attttagttgatacactttatgtttcgcctttactgttcccggaacatccttaccacagg
cttgtaaaagatgataagctaattagcgaacagatgaacaatcctgtgaacgattgcaag
aaagcaaaagacttattgaaggatgaaatagcatgctggtattcattaccgaaagaaaag
cgtataatattcacatcgttactgaaaaacaagaaagaatttgaaggatttctcagtatg
gtaagtgcagaacatatccataaaggaatacctggacttatcaaagaattttatgcggga
aagatttgccaacatgccgatcttgacatgctcatcaaccaatacccatgtggattggca
tacgctttggctctgattgataccaccgattaccgctccgtcactcccggatgggtactt
tacaattatccggaagtggaatttattgtaaaactcctgcgacacactgcttgcaaagaa
ggatgcaactattgccatacgcaattggatgtactccataatctgaaaacatttttcgga
tatgagcacttccgaacatacgaaggcgagccactgcaagaacgtgccgcccaagctgcg
gtgaaagggaaatcgctgctggctatatttcctaccggtggcggcaaatcacttaccttc
caattgcctgcactcatggcaggacactccgtgcacgggcttacggttgttatctccccc
ttgcagtccttgatgaaagaccaggtagataaccttgccgacagaggcatcacagatgcc
gtaaccataaatgggatgttagaccccatcacaagatcactgtccatacaaagagtacaa
gacggagaagcctcgctgttgtatatctctcccgaaatgctccgttcaaaaacaatcgag
aaaatattgatggcgcgccaccttgtaaggttcgtgatagacgaagcgcactgcttttct
tcatgggggcaggatttcagggttgactatctctacattggcaaattcatccaaaaatac
cagcaaaagaaaaaatgcaaaaccccgatacctgtatcttgtttcacggctacggcaaaa
cagaaagtaatccaagacatctgcgactatttcaagcagactttgaatttgaacttggaa
ttattcgcatcaacggcttcaagaacaaatctgcactattccgtcatacatgtagagaat
gacaatgacaaatatttaaaactgagagaacttgtagcagaaaccaattgtccgacaatt
gtttacgcatcacgcaccaaacggacaaaggaactggctgcaaagctgactcgcgacggt
tacaaggcactccccttcaatgggaaaatggaagccgatgaaaaaattgccaaccaagat
gctttcatgaacgatcaagtacacatcattgtggccacatccgcattcggcatgggagtc
gataagaaagatgtcgggctggtggtacattatgatatttccgattcgctggagaattat
gtacaggaagcaggaagagctggtcgtgatcccggtcttagcgcacgttgttatgtgctt
tacagtgacaatgatttggacaagcatttcatattgctaaaccaaacgaaacttagcatt
agtgaaatacaacaggtatggaaagccgtcaaaggccttaccaaacaccgtatgaaagtc
aactgttctgcgttggaaattgcccggcaagcaggatgggatgattcggtatctgacatc
gaaacccgtgtacgaacagcattggcagctttggaacaaagcggatacttggtaagagga
aacaatgcacctcatgtatatgccacaggaataacggtaaagaatatggacgaagcaagg
gaacgtatatccgcatcgctactttttggtagcgatgaaatagaaaaggcagtccgtatc
atcaagtcattgatttctcaaaaacatatcgctaaggctcaggattcggaagcagaatca
cgcatcgactatctggcagacattctgggactaagcaaaagagatgttatatctgtagtg
gagcgcatgcggcaggaaggcatattggcagacagcaaagatatatctgcctatttgcag
gatgcaggtgattcggaacgaaagtcgcaaatgctcctcgaacgctttgcaaaacttgaa
caatacattctcaaccatattcccgatgagtctttacgaatatcatacaagcaactgaat
gagaatgccgtaaacgacggaatcaacacatccaaagaaaaagacattcggacgctgctc
tatttcctcaccgtcaagggatatacgcgtaaaaaagaggatgcagtccgtaacatggag
ataagtcgtcaggcagacctggaatccaccatcaggcgatttgaaaaacgattggaaata
agtcgctttgccgtggaatggctatacaaattagcttttgatgcagaaaaaaagaatgtg
cccgacaaagccatacagttctccgtagtagagcttctgaaccgaataaaatcaagttcc
caatccctttttggcggacttgatgacattcaattagaagacgtggaagaagcacttcta
tatttatcgaaaatcggtgcgctaaagcttgaaggcggatttttggtgctttacaacgca
atgaatatccaaaggataaaagacaataagtcgagatacaagcaagacgactaccgaatg
ctgaacgaattctatagactgaaaatccaacaagtgcatattgtgggagaatatgccaac
ttgatggtgaagaattatcatgcagcactgcaatatgttcaagactatttccaaatggac
tacaggaagtttgtcacaaaatatttcaaaggagacagaacaagcgagatacaacgcaac
ttgacaccacagaaatacaatcaattatttgggcaattgtccaaacggcaaatggaaatt
atttccgataaggattcacgttgcattgtggttgcagcaggtcccggtagtggaaaaaca
cgagtattagtccacaaactggcctcactcctactacttgaagacgtgaaacacgaacag
ctactgatgctgacattttcaagggcagccgctacagagttcaaacaacggcttatggag
ttgataggcaatgcagcccattttgtcgaaataaaaacattccactcttattgcttcgac
ctcctgggacgaataggaaatcttgaggattcaaagaatgtcgtttcaaaggcagccgag
atgatatgccaaggagaagtagaaccgaacaaaatcggtaagacagtattagttatagac
gaagcccaagacatgggaacagaagaacactcacttgtaaaggctctgataactaacaat
gaagaaatgcgtgtgatagcagtaggggatgatgatcaaaatatctatgaattccgaggt
tccgattctggttatatgtaccggttggcgcaagaaagcggaagtacattcgtcgaaatg
actgagaattaccgcagcgcgcgccagcctgtagattttgccaacggattcttgaaaact
atcaataaaaggataaaaagtacacctatcatctctatgagaaaagagaaaggttgggtg
gaagtgatacgtcatcattcaacatatatgtatcagccgcttgtggaaaacttacttcaa
cacaaggacaaaggcacttcgtgtgtactcacccaaacaaacgaagaagccgtcatcttg
atagccctcctgcgaaagcatggtataaacagtaaactggtacaatcaatggacggttta
cgtttttggaacatggcggaaatgagatacttcctgaggcatatagacaaacggataaaa
acaccgctaatcacagaagaactatgggaagaagccaagcatgcaaccttttctatttat
gacagaagtctaactttgacgtatgtgaagcggtgtgtggaacagtttgaacaaaccaac
aaaacaaaatatttcagtgacttcaaggaatttgtatttgagtcgtcagtggaagacttt
tgcgacacatcaggcaccgatgtcgtggtatcaaccatccacaaggctaaaggcagggag
tttgatgatgtatatatgctcatatccgataactatgcaaaggatgcccatctgatgcgt
agatactacgtaggaataactcgtgcaaaaaacagactattcatacatacaaatggcgat
tgcttcaatcatttaagtgcaaacttatacctcattgaccaacaacactatgatatgcct
gaagaaattatactacaactctctcataaagatgtcaatttaggattcttcaaagaacgg
aaacaagaggttttagcactaagaggaggagattctttaatttacaatgatttctttttg
tatagttcatcgaccgataaacctatagcaaaattatcatcaagaatgcagggcacgtta
tctgaatgggaacaaagaggttataaggtgcaatctgcatctgtacggttcgttttggca
tggaagcccaaagatgcaccaaaagatgaaacggaaacggctgttcttttagcagacttg
agactttctttgtaa |
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