Bacteroides cellulosilyticus: BcellWH2_05341
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Entry
BcellWH2_05341 CDS
T04116
Symbol
ihfA_1
Name
(GenBank) Integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
bcel
Bacteroides cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
bcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcel03032
]
BcellWH2_05341 (ihfA_1)
03036 Chromosome and associated proteins [BR:
bcel03036
]
BcellWH2_05341 (ihfA_1)
03400 DNA repair and recombination proteins [BR:
bcel03400
]
BcellWH2_05341 (ihfA_1)
DNA replication proteins [BR:
bcel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BcellWH2_05341 (ihfA_1)
Chromosome and associated proteins [BR:
bcel03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BcellWH2_05341 (ihfA_1)
DNA repair and recombination proteins [BR:
bcel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BcellWH2_05341 (ihfA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
DUF5915
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALJ62543
UniProt:
A0A0P0GVV6
LinkDB
All DBs
Position
6845431..6845703
Genome browser
AA seq
90 aa
AA seq
DB search
MNNKEFTSELSRRLGYTIKDTSELIASLLSDMTQQLQEGNAISVQSFGTFEVKKKAERIT
INPTTKLRMLVPPKLVLTYRPSTALKDKFK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaataataaagaatttacttcagaattgtcacgaagattgggatataccataaaggac
acatccgaactgattgcatctttgctgtcggatatgacgcaacagttgcaagaaggaaat
gccatttctgtacaaagtttcggtacgttcgaggtaaagaagaaagcggagcgtatcact
atcaatcctacaaccaaattacgcatgttggttccacctaaattagtattaacatacaga
cccagcacggctctgaaagataagtttaagtaa
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