Burkholderia cenocepacia DDS 22E-1: DM39_1335
Help
Entry
DM39_1335 CDS
T03308
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03420
Nucleotide excision repair
bcen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM39_1335
03430 Mismatch repair
DM39_1335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_1335
Enzymes [BR:
bcen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM39_1335
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM39_1335
MMR (mismatch excision repair)
Other MMR factors
DM39_1335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIO34075
UniProt:
A0AAN0RUQ5
LinkDB
All DBs
Position
1:1459612..1461972
Genome browser
AA seq
786 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPATVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKGLNVDDEKFPPKNVQYFINNAKEQGLRPDKVDASDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDAQEASWIVEEIRSLINTGLSRSEVAVLYRSNAQSRAI
EHTLMTSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGAFANLIAKMRAETQQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDTPARSIPLRAGAIAAPELGAAGD
DASVEVLEPAPLDDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FAAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRSDNAGYGRDWFARPGGSREQIVDAAVSAP
LPAFADKQRAADTGFRVGQQVFHTKFGEGTVTALEGNGADAKAQVKFKRHGEKWLALAVA
KLQAVE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaacctgaaccctgaacaatatgccgccgtcacgctgccgaac
gaaccggcgctgattctcgcgggggcgggcagcggcaagacccgcgtgctgatcacgcgg
atcgcgtggctgatccagcagggctacgcgtcgcccgccaccgtgctcgccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcacgcactgg
cgcgacgcggggctgccgcaaaccttccagatcctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaagggcctcaacgtcgacgacgagaaattcccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgccccgacaaggtcgacgcgtcc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcagtgccagcgc
gagggcgtcgtcgacttccccgagctgctgctgcgctgctacgaactgcttgcatacaac
gcgccgctgcgcgcgcactaccaggcgcgcttccggcacatcctggtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctgaagatgctcgcgggcggcgagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cgctcgcacggcaacatcctcgacgccgcgaaccagctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgcaccgacgccggccacggcgagccggtgcgcgtgtacgaagcg
agcaccgatgcgcaggaagcgagctggatcgtcgaggagatccgctcgctgatcaacacg
gggctgtcgcgcagcgaggtcgcggtgctgtaccggagcaacgcgcagtcgcgcgcgatc
gagcacacgctgatgacatcgggcatcccgtaccgcgtgtacggcggcctgcgcttcttc
gagcggcaggaagtgaagcatgcgctcgcgtatctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgcgcgcgtcgtgaacttcccgacgcgcgggatcggcgcgcgctcgatc
gagcagctcgccgacgccgcgcgcctgtacggctgctcgatggccgccgcgatcccgtac
gtgacgggcaaggccggcacgagcctcggcgcgttcgcgaacctgatcgcgaagatgcgc
gcggaaacgcagcagatgagcctgcccgagacggtcgaatacgtggtgcgcgcgagcggc
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgcctcgagaacctgcaggaa
ctcgtgaacgcggcgaccgcgttcgtcagcgaggaaggctacgggctcgacacgcccgcg
cgctcgattccgctgcgcgcgggcgcgatcgcggcgccggagctcggcgcggccggcgac
gacgcgtcggtcgaggtgctcgaaccggcgccgctcgacgatcccgcgcagaaccccgac
acgatgacgccgctcgccggcttcctgtcgcacgcgtcgctcgaggccggcgacaatcag
gcgcaggccgggcaggacgcggtgcagctgatgacggtgcacgcggcgaagggcctcgaa
ttcgcggccgtgttcatcaccggcctcgaggaaggactgttcccgcacgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccgcctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacgcgctac
aacgtgcgttcgcgctttttcgacgagctgccggaacacgtgctgaagtggctgacgccg
aaggtcgaggccggttcgcgctggggcggccggtcggacaacgcgggctacgggcgcgac
tggttcgcgcggccgggcggttcgcgcgagcagatcgtcgatgcggccgtgtcggcgccg
ctgccggcgttcgcggacaagcagcgcgcagcggataccggcttccgggtcggccagcag
gtgttccatacgaagttcggcgagggcacggtcaccgcgctcgaaggcaacggcgccgat
gcgaaggcgcaggtgaaattcaagcggcacggcgagaaatggctcgcgctggcggtcgcg
aaactgcaggcggtggaatga
DBGET
integrated database retrieval system
