Burkholderia cenocepacia DDS 22E-1: DM39_1393
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Entry
DM39_1393 CDS
T03308
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcen03016
]
DM39_1393 (truB)
Enzymes [BR:
bcen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DM39_1393 (truB)
Transfer RNA biogenesis [BR:
bcen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DM39_1393 (truB)
Prokaryotic type
DM39_1393 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIO31559
UniProt:
A0AAN0RPS9
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All DBs
Position
1:1522712..1523641
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AA seq
309 aa
AA seq
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MTTASQRPRVPRRALDGVLLLDKPVGLSSNDALIRAKRLYLAKKAGHTGTLDPLASGLLP
LCFGEATKFSQDLLEADKTYEATMRLGVRTATGDAEGEVLDTRPVECDRAAVEAALARFT
GEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRSVTIHALDLLACELPDVTFRVTCSK
GTYVRTLAEDLGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDADAAARDAWLQPVDA
LLSTFPLVRLDDVCAKRFLHGQRLPLSALDPVDAADGARVRVYDATRLLGVARKANGVLA
PERLVVTAE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcatcccaacgtccgcgcgtgccgcgccgcgcgctggacggcgtgctcctg
ctcgacaagccggtcggcctgtcgagcaacgacgcgctgattcgcgcgaagcgcctgtat
ctcgcgaagaaggccggtcacaccggcacgctcgacccgctcgcatcgggcctgctgccg
ctgtgcttcggcgaggcgacgaagttctcgcaggatctgctcgaagccgacaagacctat
gaagcgacgatgcggctcggcgtgcgcaccgcgaccggcgatgccgaaggcgaggtgctc
gacacgcggccggtcgaatgcgaccgcgcggccgtggaagcggcgctcgcgcgctttacc
ggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagccgctg
tacgaatatgcgcgcgccggccagacggtcgagcgcgaaggccgcagcgtgacgattcat
gcgctggacttgctcgcatgcgagctgcccgatgtcacatttcgcgtgacctgcagcaag
ggcacgtacgtgcgcacgctggcggaggatctcggcgaggcgctcggctgcggcgcgcat
ctgacgatgctgcgtcgtacgggcgtcggcgcgctgacgctcgagcatgcggtcacgctc
gacgcattgtccgacgccgatgcggcggcgcgcgacgcgtggctccagcccgtcgacgcg
ctgctgtcgaccttcccgctggttcgtctcgacgacgtgtgcgcgaagcggttcctgcac
ggccagcgtctgccgctgtccgcactcgatccggtcgatgcggccgacggcgcgcgcgtg
cgcgtctacgacgcgacgcggctgctcggcgtcgcgcgcaaggccaacggcgtgctcgcg
ccggagcggctcgtcgtcacggcggagtaa
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