KEGG   Burkholderia cenocepacia DDS 22E-1: DM39_1564
Entry
DM39_1564         CDS       T03308                                 
Symbol
nodI
Name
(GenBank) nodulation ABC transporter NodI
  KO
K09695  lipooligosaccharide transport system ATP-binding protein
Organism
bcen  Burkholderia cenocepacia DDS 22E-1
Pathway
bcen02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:bcen00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    DM39_1564 (nodI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bcen02000]
    DM39_1564 (nodI)
Transporters [BR:bcen02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipooligosaccharide transporter
    DM39_1564 (nodI)
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_15 AAA_22 SMC_N T2SSE Gag_p12 AAA_30 AAA_16
Other DBs
NCBI-ProteinID: AIO34105
UniProt: A0AAN0RUS9
LinkDB
Position
1:complement(1683653..1684567)
AA seq 304 aa
MSVAPIDFRNVEKRYGDKLVVNGLSFHVQAGECYGLLGPNGAGKTTTLKMLLGLAHPDAG
AISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFSRYFGMSAQAARALVQPL
LEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLR
SLLARGKTILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIESEIGCDVIEIYGPDP
AALRDELASLAQRTEISGETLFCYVTDPEPLSARIKGRAGLRYLHRPANLEDVFLRLTGR
DMQD
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtccgtcgcacccatcgatttccgcaatgtcgaaaagcgctatggcgacaagctcgtc
gtcaacggcctgtccttccatgtgcaggccggcgaatgctatggcctgctcgggccgaac
ggcgccggcaagaccacgacgctgaagatgctgctcggcctcgcgcatcccgacgcgggc
gccatttcgctgtgcggcgagccggtcccgtcgcgcgcgcggcatgcgcgccagcgcgtc
ggcgtcgtcccgcagttcgacaatctcgatcccgatttcacggttcgcgagaatctgctc
gtgttcagccgctatttcgggatgtcggcgcaggccgcgcgtgcgctggtgcagccgctg
ctcgaattcgcgaagctcgagaacaaggccgatgcgaaggtgggcgaactgtccggcggc
atgaaacgccgcctcacgctcgcgcgcgcgctcgtcaacgatcccgacgtgctggtgctc
gacgagccgacgacgggtctcgacccgcaggcgcggcacctgatgtgggaacggctgcgc
tcgctgctcgcgcgcggcaagacgatcctgatcaccacgcatttcatggaggaagccgaa
cgcctgtgcgaccggctgtgcgtgatcgaggaaggccgcaagattgccgagggcgcgccg
cacgcgctgatcgaatcggaaatcggctgcgacgtgatcgagatctacgggccggacccg
gccgcgctgcgcgacgaactcgcgtcgctcgcgcagcgcaccgaaatcagcggcgagacg
ctgttctgctacgtgaccgaccccgagccgctcagcgcgcggatcaagggtcgcgcggga
ttgcgctatctgcatcgtccggccaatctggaggacgtgttcctgcggctcaccggccgc
gacatgcaggactga

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