Burkholderia cenocepacia DDS 22E-1: DM39_158
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Entry
DM39_158 CDS
T03308
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM39_158 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcen03019
]
DM39_158 (recQ)
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_158 (recQ)
Enzymes [BR:
bcen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM39_158 (recQ)
Messenger RNA biogenesis [BR:
bcen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM39_158 (recQ)
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM39_158 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIO33425
UniProt:
A0AAN0VN69
LinkDB
All DBs
Position
1:177630..179477
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGH
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPDSWDATREAQMA
LSCVFRAQRASGFNFGASHLIEILRGARTEKVLQRGHDQLSTFGIGASLSEPEWRAIFRQ
LVAYGYLAVDHGGFGALVLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRGGTRVDPTAG
MGTRERARWDALRAWRAETAKSDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaattctcgacgaagtctttggttattccgcttttcgcggccag
cagggcgagatcgtcgaacacgtcgccggcggcggcgactgtctcgtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagattccggcgctgctgcgccgcgaggccgggcac
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgcggcgctc
agcgaagtcggcgtgcgcgcggcgtacctgaactcgacgctgtcgggcgccgaggcggcc
gcgaccgagcgcgcgctgcgcgaaggcgagatcgacctgctgtacgtcgcgcccgaacgg
ctgatgacggggcgcttcctcgagctgctcgagcgcgcgaagatcggcctgttcgcgatc
gacgaagcgcactgcgtgtcgcaatgggggcacgacttccgtcccgaatacatccagctg
tcggtgctgcacgagcgcttcccgtcggtgccgcgcatcgcgctgacggccaccgccgat
gcgatcacgcgcgacgagatcatccatcgtctcgcgctcgacgacgcgcgcgtgttcgtg
tcgagcttcgaccgcccgaacatccgctaccggatcgtcgaaaaggacaacgcacgcgcg
cagctgctcgatttcattcgcgccgaacacacgaatgccgacggcaccaccgatgcgggc
gtcgtctactgcctgtcgcgccgcaaggtcgaggagacggccgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtatcacgcggggatggagttcgaggtgcggcagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtgatgtgcgcgacgatcgcgttcgggatgggc
atcgacaagcccgacgtgcgcttcgtcgcgcacctcgacctgccgaagagcgtcgagggc
tactaccaggaaaccggccgcgcgggccgcgacgggctgcccgcgaacgcgtggatggcg
tacggcctcggcgacgtcgtccagcagcgcaagatgatcgacgaatcggacgccgacgac
gcacacaagcgcgtgcagacgtcgaagctcgacgcgctgctcggcctgtgcgagacgatc
tcgtgccggcgcgtgcgcctgctgaactacttcggcgaggcgagccagccgtgcggcaac
tgcgatacgtgcctggagccgcccgattcgtgggacgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaatttcggcgcgagtcatctg
atcgagatcctgcgcggcgcgcgcaccgagaaggtgctgcagcgcgggcacgaccagctc
agcacgttcgggatcggcgcgtcgctgtccgagccggagtggcgtgcgatcttccggcag
ctcgtcgcatacggctacctggccgtcgaccacggcggcttcggcgcgctggtgctgacc
gaggccgcgaagccggtgctgaagaacgaggagaaggtcacgctgcgccgctacgtgaag
ccgcagcgcacgcgccagtcgtcgagccgcggcggcacgcgcgtggacccgactgccggc
atgggcacgcgcgaacgcgcgcgctgggacgcgctgcgcgcgtggcgcgccgaaacggcg
aagtcggacggcgtgccggcctacgtgatcttccacgatgcgacgctggccgaaatcgcg
cgcaacgcgccggagacaatcgacgacctgcggcatatccccggcatgggcgtgcgcaag
ctcgagcgcttcggcgacgagatcatcgacgtcgtcgagtcggcctga
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