Burkholderia cenocepacia DDS 22E-1: DM39_1789
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Entry
DM39_1789 CDS
T03308
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03030
DNA replication
bcen03430
Mismatch repair
bcen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM39_1789 (dnaX)
03430 Mismatch repair
DM39_1789 (dnaX)
03440 Homologous recombination
DM39_1789 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcen03032
]
DM39_1789 (dnaX)
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_1789 (dnaX)
Enzymes [BR:
bcen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM39_1789 (dnaX)
DNA replication proteins [BR:
bcen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM39_1789 (dnaX)
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM39_1789 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
AAA_assoc_2
AAA_18
TsaE
Mg_chelatase
AAA_2
DUF3646
Glyco_tranf_2_5
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIO31385
UniProt:
A0AAN0VL46
LinkDB
All DBs
Position
1:complement(1949857..1952337)
Genome browser
AA seq
826 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEEQITFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGM
LGALDQTYMVRLLDALAAGSGPEILAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG
SVLDEWPEAADLRRFAETLSPEQVQLFYQIATVGRAELGLAPDEYAGFTMTLLRMLVFEP
GVSAGSAPGGQPSVPRAVAAPRAAAAAASAAPAAKPVSAAPASAARPQAAAWAAPVARPA
AVAPAPGGDAATRPAMKPAPAPQAAPASPAAKAADAGATSQSDASARPETATAEADTPAA
VRAEAEPSAAAQRSTEAGAPTGAQRNSAPEPLAAAQQEGEPQSPAAAQRNDEPAPPAEPA
PRAAPAESAARPAARSGGAAAALDVLRNAGMRVSSDRSRAGAAPKPAAQPAAAKPAPARP
AVQVPTPRAAARAPQAGADTRHAPPPWEDIPPDDYVPLSADEMFGGPPDDGFVPVFDSGP
DDVRVAPAEARSTAPVDTRPLPPAIALDPVGFDGEWPALAARLPLKGVAYQLAFNSELTA
VDATTLKLSVPVPQYADAAQVAKLKAALADALGKPVDVTVEVGPARRTAAALDAAARAAR
QREAEQEIHGDPFVQQLVRDFGARIVEGSVRPLADPASDSAPPTLH
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtctccatcacgcc
tatctgtttaccggtacccgcggcgtcggcaagacgacgctgtcgcggatcttcgcgaaa
gcgctcaactgtgaaaccggcgtcacgtcgcagccgtgcggcgtctgccgcgcgtgccgc
gagatcgacgaaggccgcttcgtcgactacgtcgaaatggacgccgcgagcaatcgcggc
gtcgacgaaatggccgcgctgctcgagcgcgcggtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccatgcgttcaacgcgatgctg
aagacgctcgaggagccgccgccgcacgtcaagttcatcctcgcgacgaccgatccgcag
aagatccccgttaccgtgctgtcgcgctgtctgcagttcaacctgaagcagatgccggcc
gggcatatcgtgtcgcatctcgaacggatcctcggcgaagagcagatcacgttcgagccg
caggcgctgcgcctgctcgcgcgcgccgcgcagggcagcatgcgcgacgcgctgtcgctg
accgaccaggcgatcgcgtattcggcgaacgaggtgaccgaagcggcggtgtcgggcatg
ctcggcgcgctcgaccagacctacatggtgcgcctgctcgacgcgctcgcggccggcagc
ggcccggagatcctcgcgatcgccgacgagatgtcgctgcgcagcctgtcgttttccacc
gcgctgcaggatctcgcgagcctgctgcaccggatcgcgtgggcgcagttcgcgcccggc
tcggtgctcgacgaatggccggaggcggccgatctgcgccgtttcgcggagacgctgagc
cccgagcaggtgcagctgttctatcagatcgccacggtcggtcgcgcggagctcggcctc
gcgccggacgaatatgccggtttcacgatgacgctgctgcgcatgctcgtgttcgagccg
ggcgtgagcgccggcagtgcgccgggcggccagccgtcggtgccgcgggccgtggcggcg
ccgcgcgcggctgctgctgctgcgtcggccgcgcctgcggcgaagcccgtgtcggccgcg
ccggcgtcggccgcccgcccgcaagctgctgcttgggctgcgcctgttgcacgtccggca
gcggttgcgccggcaccgggcggcgacgctgccacccggccggccatgaaacccgcccct
gcgccgcaagccgcgccggcttcgcccgccgcgaaggcggcggacgctggagcaacgtcg
cagtcggacgcaagtgcccgaccggaaacggcgacagccgaggccgatacgccggcggcc
gttcgcgccgaagctgaaccttccgccgccgcgcagcgcagcaccgaagccggtgcgcca
accggcgcgcagcgaaacagcgcgccggaaccgctcgccgctgcacagcaggagggcgag
cctcaatcgcccgccgccgctcagcgcaacgacgagcccgcaccgccggccgaaccggcg
ccgcgtgccgcgccggccgagtccgccgcgcgcccggccgcccgttcgggcggcgcggcc
gccgcgctcgacgtgctgcgcaacgccgggatgcgcgtgtcgtccgatcgttctcgcgcg
ggcgctgcacccaagccggcggcccagccggccgccgcgaagccggcgccggcgcgtccg
gccgtacaggtgccgacgccgcgcgctgccgcccgcgcgccgcaggccggcgcggacacg
cgccacgcgccgccgccgtgggaggacatcccgccggacgactacgtgccgctcagtgcc
gacgagatgttcggcggcccgcctgacgacggcttcgtgcccgtgttcgacagcggcccc
gacgacgtgcgtgtcgcgccggcggaagcacgatcgaccgcaccggtcgacacgcgtccg
ctgccgcccgcgatcgcgctcgatccggtcggcttcgacggcgaatggcctgcgctcgcc
gcgcggctgccgctcaagggcgtcgcctatcagctcgcgttcaacagcgagctgacggcc
gtcgacgccacgacgctgaaattgtcggtgccggtcccgcagtacgcggacgcggcccag
gtcgcgaagctgaaggccgcgctggccgacgcgctcggcaagcccgtcgacgtgacggtc
gaggtcgggcccgcgcgccgcaccgcggcggcgctcgacgcggccgcgcgcgcggcgcgc
cagcgcgaagccgagcaggagattcacggcgatccgttcgtccagcagctcgtgcgcgat
ttcggcgcacgcatcgtcgaaggctccgtgcgtccgctcgccgatccggcgtcggacagc
gcgccgccgacgctgcattga
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