Burkholderia cenocepacia DDS 22E-1: DM39_1791
Help
Entry
DM39_1791 CDS
T03308
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM39_1791 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcen03021
]
DM39_1791 (rho)
03019 Messenger RNA biogenesis [BR:
bcen03019
]
DM39_1791 (rho)
Transcription machinery [BR:
bcen03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DM39_1791 (rho)
Messenger RNA biogenesis [BR:
bcen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DM39_1791 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIO31272
UniProt:
A0A071MBD8
LinkDB
All DBs
Position
1:1953570..1954832
Genome browser
AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctcaaa
aagcgcgccaagacgggagagacgatcttcggcgacggtacgctcgaagtgctgccggac
ggcttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctat
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacacgatcgaaggcgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtcgcatcgccg
aagtccggcaagaccgtgatgctccagcacatcgcgcatgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccctgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcgtcgaccttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgagatgaagcacgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcccgcgcctacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggcggtgtggacgcgaacgcgctgcagcgcccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggttcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtgtacccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaggaaatgctgatcaagcccgaaattcttcagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcaatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacctgatgcgccgcggcggc
taa
DBGET
integrated database retrieval system
