Burkholderia cenocepacia DDS 22E-1: DM39_2153
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Entry
DM39_2153 CDS
T03308
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM39_2153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_2153
Enzymes [BR:
bcen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DM39_2153
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM39_2153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AIO31774
UniProt:
A0AAN0VLG3
LinkDB
All DBs
Position
1:complement(2352102..2352980)
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AA seq
292 aa
AA seq
DB search
MATARKAPVRRATPVAARPAAKRAPAAKADAARAVPNGALNGHAQPAAKPARAKGADAAQ
PEPAMPAADATRKTRASDAAIDGADVGVRPAYWDKACADLVKRDRILKKLIPKFGPAHLV
KRGDPFVTLARSVVGQQISVPSAQSLWARIEAACPRLAPQPVIRLGADKLIACGLSKRKT
EYILDLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLD
DPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDAPDADA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccagaaaagcgccggtcaggcgtgcgactccggtcgccgcgcgtccggca
gccaagcgcgcgccggcggcgaaggcggacgcggcgcgcgccgtgccgaacggcgcactc
aacggtcacgcgcagccggcggcgaagcccgcgcgcgcgaagggcgccgatgcggcgcag
ccggagcccgcgatgccggccgccgacgcgacccgcaagacgcgcgcgtccgatgcggcg
atcgacggcgcggatgtcggcgtacgtcccgcatactgggacaaggcctgcgccgatctc
gtcaagcgcgaccgcatcctgaagaaactgatcccgaagttcgggcccgcgcatctcgtc
aagcgcggcgatccgttcgtcacgctcgcgcgctcggtcgtcggccagcagatctcggtg
ccgtccgcgcagtcgctgtgggcgcgcatcgaggccgcgtgcccgaggctcgcgccgcag
ccggtgatccggctcggtgcggacaagctgatcgcgtgcggcttgtcgaagcgcaagacg
gaatacattcttgatctggcgcagcacttcgtgtcgggtgcgctgcacgtcgacaaatgg
acgtcgatggacgacgaggacgtgatcgcggaactcacgcagatccgcggcatcagtcgc
tggacggccgagatgttcctgatcttcaacctgtcgcggccggacgtgctgccgctcgac
gatccgggcctgatccgcgcgatcagcgtcaattacttcagcggagaacccgtcacgcgc
agcgaggcgcgggaagtcgcagccaactgggagccgtggcgcaccgtcgcgacctggtac
atgtggcgcagtctcgatgcgcccgacgccgacgcctga
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