Burkholderia cenocepacia DDS 22E-1: DM39_2303
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Entry
DM39_2303 CDS
T03308
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM39_2303 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_2303 (uvrB)
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM39_2303 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM39_2303 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
Kinesin
Phage_T4_Y10B
DALR_1
FlaG
Motif
Other DBs
NCBI-ProteinID:
AIO32979
UniProt:
A0AAN0RSF0
LinkDB
All DBs
Position
1:complement(2518176..2520266)
Genome browser
AA seq
696 aa
AA seq
DB search
MSEHHAEVGDALDESKFVTFEGSPFQLYQPYPPAGDQPTAIDTLVEGVEDGLAFQTLLGV
TGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRTGDKLGQREVIARLIAMQYTRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRVELFDDE
VDTLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVMRAVETIKEELRERLEFFHRDGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDES
HVLIGQLNGMYNGDRARKENLVNYGFRLPSALDNRPLKFHEFERKMRQVVFVSATPADYE
QRVTGQVAEQVVRPTGLVDPEIEVRPASSQVDDVLAEINARVKAGERVLITVLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKAILYADNMTDSMKRAIGETERRRAKQIAYNEQ
MGITPRGVVKRIKDIIDGVYNADEARAELKEAQQRAKFEDMSEKQLAKEIKRLEKQMADY
AKNLEFEKAAATRDQLALLRERVFGANVGDHVSGGR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacatcatgccgaagtcggcgacgcgctcgacgaatcgaaattcgtgactttc
gaaggctcgccgttccagctctatcaaccgtatccacccgccggcgaccagccgaccgcg
atcgacacgctcgtcgaaggcgtcgaggacggcctcgcgttccagacgctgctcggcgtg
acgggctcgggcaagaccttcacgatggcgaacacgatcgcgcggctcggccgcccggcg
atcgtgttcgcgccgaacaagacgctcgccgcgcagctctacgcggagttccgcgaattc
tttccgcgcaacgcggtcgagtacttcgtgtcgtactacgactactaccagcctgaggcg
tatgtgccgcagcgcgacctgttcatcgagaaggactcgtcgatcaacgagcatatcgaa
cagatgcggctgtcggcgaccaagagcctgatggagcgccgcgacgtggtgatcgtcgcg
acggtgtccgcgatctacggtatcggcaatccgtccgaataccaccagatgatcctgacg
ctgcgcaccggcgacaagctgggccagcgcgaagtgatcgcgcggctgatcgcgatgcag
tacacgcgcaacgaacaggatttccagcgcggcacgttccgcgtgcgcggcgacacgatc
gacatcttcccggccgaacacgcggagatggccgtgcgcgtcgagctgttcgacgacgag
gtcgacacgctgcaactgttcgatccgctgaccggccgcgtgcggcagaagatcccgcgc
ttcaccgtctatccgtcgtcgcactacgtgacgccgcgcgacaccgtgatgcgcgcggtc
gagacgatcaaggaggaactgcgcgagcggctcgagttcttccatcgcgacggcaagctg
gtcgaggcgcagcgcctcgagcagcgcacccgcttcgatctcgagatgctgcaggagctc
ggcttctgcaagggcatcgagaactattcgcggcatttttcgggcgcggcgcccggcgag
ccgccaccgacgctggtcgactatctgccgcccgatgcgctgatgctgctcgacgaatcg
cacgtgctgatcggccagttgaacgggatgtacaacggcgaccgcgcgcgcaaggaaaat
ctcgtcaactacgggttccggctgccgtcggcgctcgacaaccggccgctcaagtttcat
gaattcgagcgcaagatgcgccaggtggtgttcgtgtcggccacgccggccgattacgag
cagcgcgtgacggggcaggtcgccgagcaggtcgtgcggccgaccggcctcgtcgatccg
gaaatcgaagtgcgcccggcgagctcgcaggtcgacgacgtgctggccgagatcaacgcg
cgcgtgaaggccggcgagcgcgtgctgatcaccgtgctgaccaagcggatggccgagcag
ctgaccgaatttctcgccgaccacggcgtcaaggtgcgctacctgcacagcgacatcgac
acggtcgagcgcgtcgagatcatccgcgacctgcggctcggcacgttcgacgtgctggtc
gggatcaacctgctgcgcgagggtctcgacattccggaggtgtcgctcgtcgcgatcctc
gacgcggacaaggagggcttcctgcgcgccgagcgctcgctgatccagacgatcggccgc
gcggcgcgcaacgtgaacggcaaggcgattctctatgccgacaacatgaccgactcgatg
aagcgcgcgatcggcgagaccgagcggcgccgcgcgaagcagatcgcgtacaacgagcag
atgggcatcacgccgcgcggcgtcgtcaagcgcatcaaggacatcatcgacggcgtgtac
aacgccgacgaggcgcgcgcggagctgaaggaggcgcagcagcgcgcgaaattcgaggac
atgtcggagaagcagctcgcgaaggaaatcaagcgcctcgaaaagcagatggccgattac
gcgaagaacctcgagttcgagaaggccgcggcgacccgcgaccagctcgcgctgctgcgc
gagcgcgtgttcggcgcgaatgtcggcgatcacgtgagcggcggccggtaa
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