KEGG   Burkholderia cenocepacia DDS 22E-1: DM39_288
Entry
DM39_288          CDS       T03308                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bcen  Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bcen00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM39_288 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bcen02044]
    DM39_288 (clpV)
Secretion system [BR:bcen02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DM39_288 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small Clp_N AAA_16 AAA_22 nSTAND3 AAA_7 Sigma54_activat AAA_30 ResIII TniB Zeta_toxin T2SSE SRP54 NACHT ABC_tran_CTD ARM_KDM8_N SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AIO32830
UniProt: A0AAN0RS85
LinkDB
Position
1:298800..301469
AA seq 889 aa
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLEEPAGDLPLALRASR
IDPHALRADLERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLAL
LTAPDLAQFAQRMSAQFADVNVTDLKHKFDEIVAGSSEAEPRQADAGDGDAAPAADGAAA
AAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAH
PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR
RFQVVKVEEPSEPLAAAMLRGMAGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
SVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGAAHDERLGELRTGRD
AALEQLAKDEARYEAERAIVAEITELREALDHARGPSDDGQPVDVQATRDKLAERVAALH
ALQGGEPMVPLQVDGHVVAEIVAAWTGIPLGRMVKDEIDTVLNLQPLLAARVIGQDHALE
AIAQRVRTASASLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMVTINMSEYQ
EAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGM
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALADALRPQLYKTFKPA
FLGRMKVVPYYPISDDVLAEIIELKLERIRRRIEANHKAVFEWDESLVDAVLARCTEVDS
GARNVDHILNGTLLPEIAGHVLGRIADGAAIARIAVRADEAGEFAYTVE
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgagcacgcccctgaagaccctgatcacgaaactgaatccgctgtgccggcatgcgacc
gaacgcgcggcgagcgcatgcctggcgcgcggccattacgaggtcgatctggagcacctg
ttcctcgcgctgctcgaggagccggcgggcgacctgccgctcgcgctgcgtgcgagccgc
atcgatccgcacgcgctgcgcgccgacctggaacgcgagctgacgcgcctgaagaccggc
aacacgcgcacgccggtgttctcggtgcacctgatcgcgctgttcgagcaggcgtggctg
atcgcgtcgctcgactcgcagctcggccgcatccgttccgggcatctgctgctggcgctg
ctgacggcgcccgacctcgcgcagttcgcgcagcggatgtccgcgcagttcgcggacgtc
aacgtgacagacctgaagcacaagttcgacgagatcgtggccggctccagcgaagcggaa
ccgcgccaggccgatgcgggcgacggcgacgccgcgcctgcggccgacggcgccgcagcc
gcggccgggccgtcgaagacgcccgcgctcgacacgtacacgaccaatctcacgcagcgc
gcgcgcgacggcaagatcgacccggtgatcggccgcgaggcggagattcgccaggcgatc
gacatcctgatgcggcgccgccagaacaacccgatcatgaccggcgaggccggcgtcggc
aagaccgccgtcgtcgagggcctcgcgctgcggatcgcggccgacgacgtgccgccgccg
ttgcgcggcgtcgcgctgcacgtgctcgacatggggctgctgcaggccggcgcgagcgtg
aagggcgagttcgagaaccggctgaagagcgtgatcgacgaggtcaagaagagcgcgcac
ccgatcatcctgttcatcgacgaggcgcacacgatcatcggcgcgggcggccaggccggc
cagaacgatgcggcgaacctgctgaagccggcgctcgcgcgcggcgagctgcgcacgatc
gccgcgacgacgtggagcgaatacaagaagtacttcgagaaggatgcggcgctcgcgcgg
cgcttccaggtcgtgaaggtcgaggagccgagcgagccgcttgcggccgccatgctgcgc
gggatggccgggctgatggagaagcacttcaacgtgcgcatcctcgacgatgcgatcacc
gaagccgtgcgcctgtcgcaccgctacatcagcggccgccagctgccggacaaggcgatc
agcgtgctcgacaccgcatgcgcgaaggtcgcgctcgcgcacagcgcgacgccggccgcg
atcgacgatacgaaaaagcgcatcgagcggatcgatgcggaaatcgcctcgctcgaacgc
gaggcggccggcggcgcggcgcacgacgagcggctcggcgagctgcgtaccgggcgcgac
gcggcgctcgaacagctggcgaaggacgaagcgcgctacgaagcggagcgcgcgatcgtc
gccgagatcaccgaactgcgcgaagcgctcgaccatgcacgcggtccgtccgacgacggc
cagccggtcgacgtgcaggccacgcgcgacaagctcgccgagcgcgtcgcggcgctgcat
gcgttgcagggcggcgagccgatggtgccgctgcaggtcgacggccatgtcgtcgccgag
atcgtcgccgcgtggacgggcattccgctcggccggatggtgaaggacgagatcgacacc
gtgctgaacctgcagccgctgctcgccgcgcgcgtgatcggccaggaccatgcgctcgag
gcgatcgcccagcgcgtgcgtacggcgtccgcgagcctcgaggatccgaacaagccgcgc
ggcgtgttcatgttcgtcgggccgtcgggcgtcggcaagaccgagaccgcgcttgcgctg
gccgacatcctgtacggcggcgagcgcaagatggtcacgatcaacatgagcgagtaccag
gaagcgcacagcgtgtcgggcctgaagggttcgccgccgggctacgtcggctacggcgag
ggcggcgtgctgaccgaggccgtgcgtcgcaatccgtattcggtcgtgctgctcgacgag
gtcgagaaggcgcacccggacgtgctcgagatgttcttccaggtgttcgacaagggcatg
atggacgacgccgaagggcgcgagatcgatttccgcaacacgctgatcatcctgacgtcg
aacgtcggctcggccgcggtgatgcaggcatgcctgaacaagccggccgaggagctgccc
gatccggacgcgctcgccgacgcgctgcgcccgcagctgtacaagaccttcaagcccgcg
ttcctcggccgcatgaaggtggtgccgtactacccgatctccgacgacgtgctggccgag
atcatcgagctgaagctcgagcggatccgccgccgcatcgaagcgaaccacaaggccgtg
ttcgagtgggacgagtcgctcgtcgatgcggtgctcgcgcgctgcaccgaggtcgattcg
ggcgcccgcaacgtcgaccacatcctgaacggcacgctgctgccggagatcgcgggccat
gtgctgggccggatcgccgacggcgcggccatcgcgcgcatcgcggtgcgcgcggacgag
gccggcgaattcgcgtataccgtcgaatga

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