KEGG   Burkholderia cenocepacia DDS 22E-1: DM39_2887
Entry
DM39_2887         CDS       T03308                                 
Name
(GenBank) P-loop ATPase family protein
  KO
K06958  RNase adapter protein RapZ
Organism
bcen  Burkholderia cenocepacia DDS 22E-1
Brite
KEGG Orthology (KO) [BR:bcen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcen03019]
    DM39_2887
Messenger RNA biogenesis [BR:bcen03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     DM39_2887
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_22 AAA_28 AAA_16 nSTAND_NTPase5 AAA_18 AAA_29 CoaE FtsK_SpoIIIE SLFN-g3_helicase AAA_23
Other DBs
NCBI-ProteinID: AIO31628
UniProt: A0AAN0RPQ6
LinkDB
Position
1:3143076..3143984
AA seq 302 aa
MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELTRYLAEEGQRRLAVAIDARS
SASLDEMPGLIRALSREHDVRVLFLNASTQALIQRFSETRRRHPLSGSPSHDANVGLLSS
LEEAIERERELVAPLAEFGHQIDTSTLRANALRTWVKRFIEQKNNDLMLMFESFGFKRGV
PLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHAFLMKWLPHF
REDNRSYLTVAIGCTGGQHRSVFIAETLAARVAHEANVIVRHRDAPVDVDASSRLVTEVD
RP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcgcatcgtcctcatcaccggcatctccggctccggcaagtccgtcgcgctgaacgcg
ctcgaagacgcaggctactattgcgtcgacaacctgccgccgcacgtgctgcccgaactc
acccgctatctcgccgaggaaggccagcgccggctcgcggtcgcgatcgacgcacgctcg
agcgcgtcgctcgacgagatgccgggcctgatccgcgcactgtcgcgcgagcacgacgtg
cgcgtgctgttcctcaatgcgagcacccaggcgctgatccagcgcttctccgaaacgcgc
cgccgccatccgctgtccggctcgccgtcgcacgacgcgaacgtcgggctgctgtcgtcg
ctcgaggaggcgatcgagcgcgagcgcgaactcgtcgcgccgctcgccgagttcggccac
cagatcgacaccagcacgctgcgcgcgaacgcgctgcgcacctgggtcaagcgcttcatc
gagcagaagaacaacgacctgatgctgatgttcgagtcgttcggcttcaagcgcggcgtg
ccgctcgacgcggacctgatgttcgacgtgcgcgcgctgcccaatccgtactacgaccac
gagttgcgcccgctcaccgggctcgaccagccggtcatcgcctttctcgacgcactgccg
atcgtccaccagatgatcgacgacatccatgcgttcctgatgaaatggctgccgcacttc
cgcgaagacaaccgcagctacctgaccgtcgccatcggctgcacgggcggtcagcatcgc
tcggtgttcattgcggaaacgctcgccgcgcgcgtcgcgcacgaggcgaacgtgatcgtg
cggcatcgtgacgcgccggtggatgtcgacgcgtcgtcgcggctcgtcaccgaggtcgac
cgaccctag

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