Burkholderia cenocepacia DDS 22E-1: DM39_2890
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Entry
DM39_2890 CDS
T03308
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM39_2890 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_2890 (mutM)
Enzymes [BR:
bcen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DM39_2890 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DM39_2890 (mutM)
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM39_2890 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Auto_anti-p27
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AIO33254
UniProt:
A0AAN0RT92
LinkDB
All DBs
Position
1:complement(3145816..3146643)
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AA seq
275 aa
AA seq
DB search
MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL
LFEIDAGWFIVHLGMTGTLRVLPAAGVPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHP
REAGDVHAHPLLASLGVEPFSSAFSGALLHARTRGRTVSVKQALLAGDIVVGVGNIYASE
SLFRAGIRPTTAAGRVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDC
FVYDRAGAPCRVCGTPIRQIVQGQRSTYFCPTCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaagtcgaagtcacgcgccggggcatcgcgccctttgtcgcgggc
cgccgcgtcgagcgtgtcgacgtccgtaccgcgatgctgcgctggcccgtgccggccggg
ctcgcggaacagctgcgcgcgcgcgaggtgctcgccgtcgagcggcgcggcaagtatctg
ctgttcgaaatcgacgcgggctggttcatcgtccacctcggcatgaccggcacgctgcgc
gtgctgccggccgccggcgtgccggtcgccgcgaaacacgaccacatcgactggatcttc
gacgaattcgtgctgcggttccgcgatccgcggcgcttcggcgccgtgctgtggcacccg
cgcgaggcgggcgacgtgcatgcgcatccgctgctcgcgagcctcggcgtcgagccgttc
tcgtcggcgttcagcggcgcgctgctgcatgcgcgcacgcgcgggcgcacggtgtcggtc
aagcaggcgctgctcgcgggcgacatcgtcgtcggcgtcggcaacatctacgcgtcggag
agcctgttccgcgccggcatccgcccgaccacggccgccggcagggtgtcgctgccgcgc
tacgagcggctggccgacgcggtgcgcgcgacgctggccgacgcgatcgagcgcggcggc
agcaccttgcgcgatttcgtcggcagcaacggcgaaagcggctatttccagctcgactgc
ttcgtctatgatcgcgcgggcgcgccgtgccgcgtttgcggcacgccgatccggcaaatc
gtgcagggccagcggtcgacctatttctgtccgacctgccagcgttga
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