Burkholderia cenocepacia DDS 22E-1: DM39_3128
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Entry
DM39_3128 CDS
T03308
Name
(GenBank) transglycosylase SLT domain protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcen01011
]
DM39_3128
Enzymes [BR:
bcen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DM39_3128
Peptidoglycan biosynthesis and degradation proteins [BR:
bcen01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DM39_3128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
AIO34033
UniProt:
A0AAN0RUL5
LinkDB
All DBs
Position
1:complement(3402155..3404107)
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AA seq
650 aa
AA seq
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MSNSLFRVYRAVALALSAATLVAGTAACAAPNDDTLPGDDQIFVQLREAARRNDAAKAAQ
LAAMIPNYPVPSYVEYFQIKPQLFDSTGRARVDAPDAPVQSFLQRYDGQAIADRMRNDYL
LVLGARHDWRSFDDQYKRFVLDDDTQVKCYALESRAARGENVADAARALLVEPKNYGDAC
VDLITALTVNQQFTSDDVWQQARLAYEQNYTTLGGKIVDALGPRPVAFDQATSAPPLYLA
RGIGPDPVSHQLALIAISRMARNDPDAAAGMLTSIAGSLTKQEQAIAWGAIGYQGAIKRS
PLASVWYAKSANAPLSNPGYEWRTRAALLAGNWPMVRWSIEQMPPSLRDDPAWIYWHARA
LKQSGDTLQANQEFEQVAGQFNFYGQLAGEELGQRTTIPPRTKVSDAEVDAMSKIPGFAL
AQRFYALNLRLEGNREWNWPLRGMTDRQLLAAAEYGKRIDLLDRTVNTADRTKAEHDFTL
RYPAPYRNIVERYAQSTGLDTEWAYGLIRQESRFIISARSSVGAGGLMQLMPATAQMVAK
KLGMGTITRAQMHDIDTNIQLGTWYLADIYNNFDSSPVLATAGYNAGPGRPRQWRQVLTQ
PVEGAIFAETIPFNETRDYVKNVLSNTVYYAALFEGKPQSLKKRLGMISP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacagccttttccgagtatatcgcgcggtcgcgctggcactgtcggccgccacg
ctcgtcgcgggcacggccgcgtgcgccgcaccgaacgacgacacgctccccggggatgac
cagatcttcgtgcagcttcgcgaagccgcgcgccgcaacgacgccgcgaaggccgcacag
ctcgccgcgatgattccgaactatccggtgccgtcctacgtcgagtatttccagatcaag
ccgcagttgttcgattcgacgggccgcgcgcgcgtggacgcgccggacgcgcccgtgcag
tcgttcctgcagcgctacgacggccaggcgatcgccgaccgcatgcgcaacgactatctg
ctcgtgctgggcgcgcgccacgactggcgcagcttcgacgatcaatacaagcgcttcgtg
ctcgacgacgacacgcaggtcaagtgctacgcgctcgaatcgcgcgcggcgcgcggcgag
aacgtcgccgatgcggcgcgtgcgctgctcgtcgagccgaagaactacggcgacgcatgc
gtcgacctgatcaccgcgctgacggtcaaccagcagttcacgagcgacgacgtgtggcag
caggcgcgtctcgcgtacgaacagaactacacgacgctcggcggcaagatcgtcgacgcg
ctcggtccgcgcccggtcgcgttcgaccaggcgacgagcgcgccgccgctgtatctcgcg
cgcggcatcggccccgaccctgtgtcgcaccagctcgcgctgatcgcgatcagccgcatg
gcgcgcaacgatcccgacgccgcagcagggatgctcacgtcgatcgccgggtcgctgacg
aagcaggagcaggcgatcgcgtggggcgcgatcggctaccagggcgcgatcaagcgctcg
ccgctggcgtcggtctggtacgcgaaatccgcgaatgcgccgctgtcgaacccgggctac
gaatggcgcacgcgcgccgcgctgctcgccggcaactggccgatggtgcgctggtcgatc
gagcagatgccgccgtcgctgcgcgacgatccggcgtggatctactggcatgcgcgcgcg
ctcaagcagagcggcgacacgctgcaggcgaaccaggaattcgagcaggtcgcgggccag
ttcaacttctacgggcagctcgccggtgaagagctcggccagcgcacgacgatcccgccg
cgcacgaaggtgagcgacgccgaggtcgacgcgatgagcaagatcccgggcttcgcgctc
gcgcagcgcttctacgcgctgaacctgcgcctcgaaggcaaccgcgaatggaactggccg
ctgcgcgggatgaccgatcgccagctgctcgcggccgccgaatacggcaagcgcatcgac
ctgctcgaccgcaccgtcaacacggccgaccgcaccaaggccgagcacgacttcacgctg
cgctatccggcgccgtaccgcaatatcgtcgagcgttacgcgcagtcgacgggcctcgac
accgaatgggcctacgggctgatccgccaggaatcgcgcttcatcatcagcgcgcgttcg
tcggtgggtgcgggcggcctgatgcagctgatgccggcgacggcccagatggtcgcgaag
aagctcggcatgggcaccatcacgcgcgcgcagatgcacgacatcgataccaacatccag
ctcggcacctggtatctggcggacatctacaacaacttcgacagctcgccggtgctggcc
accgcgggctacaacgcgggccccggccggccgcgccagtggcgccaggtgttgacgcag
cccgtcgaaggcgcgatcttcgcggagacgattccgttcaacgagacgcgcgactacgtg
aagaacgtactgtcgaacaccgtctactacgcggcgctcttcgagggcaaaccgcagtcg
ttgaagaaacgtctaggcatgatctcgccctga
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