Burkholderia cenocepacia DDS 22E-1: DM39_3393
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Entry
DM39_3393 CDS
T03308
Name
(GenBank) tonB dependent receptor family protein
KO
K16092
vitamin B12 transporter
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcen02000
]
DM39_3393
Transporters [BR:
bcen02000
]
Other transporters
Pores ion channels [TC:
1
]
DM39_3393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AIO35464
UniProt:
A0AAN0VQ66
LinkDB
All DBs
Position
2:complement(13466..15394)
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AA seq
642 aa
AA seq
DB search
MKLRHLLATSAATALLSPLAHAAGDTALPQPAQPADNADLPTISVTDTRHLPESFDQRYA
TTQVLTRDDLDRLSPSDPSITQALATLPGVTVSQNGGPGASSSVSIRGSSASQVAVFIDG
IRIGSSTTGIAPWADLPTEAFERVEVISGPAAASFGANAMGGVVQLFTRRAANQPNQTTV
SFGGGSNKTFDTQVRTSGTVPSSGPLAALGGLTYSLGLHDYATAGIDATRPFAYGHEEGR
NPYHAQDIDARLGYARDNWSISTFALYHRSDLSYDNAGGADRELDHQLTAGLSFHLDITP
DTQFDQSVGYSNDRQFLYASDPAIATDQINSQRISTSTSLTHQERGFSLFGQPLSGETKL
AYDFTREQAFLPVDIPNGVPTRNDSAFSLHQSVTLGKVTMFLAGRHEIVAGRSVNTGNAA
LSWAITPVYTARLSYGNAFRLPTFNDLYYPGYGNPDLSPERGNSVEAALDATTSLGTFTA
AIYDTRVHNLIAYDPATFQPVNIGRAHIRGLDLSYKGTIGRSTPVSVAIGLLNPQDTTNQ
TWLNRRPRQTVSISIDHTWDELHLHALSTGASLRYGGTTFDDPANTTYLPSYLTADLRAS
YRINSHLSVSALLSNLFDRRYMTAYGYNTVGRAAFGKVTYTF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccgacatctcctcgccacgtccgccgccaccgcgctgctgtcgccgctcgcg
cacgccgccggcgacaccgccctgccgcagccggcgcagcccgcagacaacgccgacctg
ccgacgatctccgtcaccgacacgcgccacctgcccgaatcgttcgaccagcgctatgcg
acgacgcaggtgctcacgcgcgacgacctcgaccggctgtcgccaagcgatccgagcatc
acgcaggcgctcgcgacgctgccgggcgtgaccgtgtcgcagaacggcggccccggcgcg
tcgtcgtccgtcagtattcgcggctcgtcggcaagccaggtcgcggtgttcatcgacggc
atccggatcggctcgtcgaccaccggcatcgcgccctgggcggatctgccgaccgaggcg
ttcgagcgcgtcgaagtcatctcggggccggcggccgcctcgttcggcgcgaacgcgatg
ggcggcgtcgtgcagttgttcacgcggcgcgcggcgaaccagccgaaccagaccacggtg
tcgttcggcggcggctcgaacaagaccttcgacacgcaggtccgcacgtcgggcacggtg
ccgtcgagcgggccgctcgccgcgctcggcgggctcacctactcgctcggcctgcacgat
tacgcgacggccggcatcgacgcgacgcggccgttcgcgtacggccacgaggaaggccgc
aacccgtatcacgcgcaggatatcgacgcacgcctcggctatgcgcgcgacaactggtcg
atctcgacgttcgcgctgtaccaccgctccgacctgtcctacgacaacgcgggcggcgcc
gatcgcgagctcgaccaccagttgacggccggcctgtcgtttcatctcgacatcacgccg
gacacgcagttcgaccagtccgtcggttactcgaacgatcgccagttcctgtacgcgagc
gacccggcgatcgcgaccgaccagatcaattcgcagcgcatcagcacgtcgacgtcgctg
acgcaccaggaacgcggcttcagcctgttcggccagccgctgtcgggcgagaccaagctc
gcatacgatttcacgcgcgaacaggcgttcctgccggtcgacatcccgaacggcgtgccc
acgcgcaacgattccgcgttctcgctgcaccagtcggtgacgctcggcaaggtcacgatg
ttcctcgcgggccgtcacgagatcgtcgccgggcggtcggtgaacacgggcaacgcggcg
ctgtcgtgggcgatcacgccggtctacaccgcacgcctgtcgtatggcaacgcgttccgg
ctgccgaccttcaacgatctctactatcccggatacgggaatccggatctcagccccgag
cgcggcaactcggtcgaggccgccctcgatgcgacgacgtcgctcggcacgttcacggcc
gcgatctacgacacgcgcgtccataacctgatcgcgtacgatcccgcgacgttccagccg
gtcaacatcgggcgcgcgcacattcgcgggctcgacctgtcgtacaagggaacgatcggc
cgctcgacgccggtcagcgtcgcaatcggcctgctgaatccgcaggacacgaccaaccag
acgtggctgaatcgccgtccgcgacaaacggtcagcatcagcatcgatcacacgtgggac
gaactgcacctgcacgcgctgagcaccggcgcgtcgctgcgctacggcggcacgacgttc
gacgatccggccaacacgacctatctgccgtcgtacctgacggcggacctgcgcgcgtcg
taccggatcaattcacatctgtcggtgtcggcgctgctgtccaacctgttcgaccgtcgc
tatatgacggcctacggttacaacacggtcggcagggctgcgttcggcaaggtcacttac
acgttctga
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