Burkholderia cenocepacia DDS 22E-1: DM39_3493
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Entry
DM39_3493 CDS
T03308
Name
(GenBank) DEAD_2 family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DM39_3493
09124 Replication and repair
03420 Nucleotide excision repair
DM39_3493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcen03021
]
DM39_3493
03036 Chromosome and associated proteins [BR:
bcen03036
]
DM39_3493
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_3493
Enzymes [BR:
bcen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DM39_3493
Transcription machinery [BR:
bcen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DM39_3493
Chromosome and associated proteins [BR:
bcen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DM39_3493
DNA repair and recombination proteins [BR:
bcen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DM39_3493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIO34973
UniProt:
A0AAN0RVZ5
LinkDB
All DBs
Position
2:complement(139611..141911)
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSNRGARYETEIALTGSWGT
LTVRGRADGYDPVSNRLEEIKTYRGSLDAMPANHRALHWAQAKVYAHLMCAARGLAEIDV
ALVYFDIVSERETVLTETLSASALAAFFAEQCACFVGWAERETAHRAARDAALRALAFPH
GRFRSGQRELAVSVYRAARDERCLIAQAPTGIGKTLGTVFPLLKACGEGEIDHVFFLTAK
TPGRALALDAAATLGAGTPALPLRVLELVARDKACEHPDKACHGESCPLAQGFYDRLPAA
RDAAIDAGLLDRDTVRAAALAHDICPYYLAQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRIGVLVDEAHNLLDRARKMYSASLDPFAFAAAREAAPAALRKAFDRLARAWGALNRA
QAERYAAYPDIPGPIVSAVQNLVAAIGEHLADAPRANGDALLRFHFDAIQFGVLAEAFDS
ASIFDATLHGEPLPRQPALDGVASAGRRRRVQSTLCVRNVIPAGFLAPRYDAARATVLFS
GTLSPFHFYRDTLGLPADTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYAARPGNYLGFLSSFDYLQRVVSLMQVRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GIGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgtggtcgcggtgcgggcgatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcccgcgccgaccgcgctcgaaggcattgccggccacggcgcggtg
acatcgaaccgcggcgcgcgctacgagaccgagatcgcgctgaccggcagctggggcacg
cttaccgtgcgcggccgcgcggacggctacgacccggtgtcgaaccgtctcgaggaaatc
aagacctatcgcggcagcctcgacgcgatgcccgcgaaccatcgcgcgctgcactgggca
caggcgaaggtctacgcgcatctgatgtgcgctgcgcgcggtctcgcggaaatcgacgtc
gcgctcgtctacttcgacatcgtgtcggaacgcgagaccgtgctgaccgaaacgctgagc
gcaagcgcgctcgcggcgttcttcgcggagcagtgcgcctgcttcgtcggctgggccgag
cgcgagaccgcccaccgcgcggcccgcgacgcggcgctgcgcgcgcttgcgtttccgcac
gggcggtttcgcagcggacagcgcgagctggccgtgtccgtctatcgcgcggcgcgcgac
gaacgctgcctgatcgcgcaggcgccgaccggcatcggcaagacgctcggcaccgtgttt
ccgctgctgaaggcgtgcggcgaaggcgagatcgaccatgtgttcttcctgaccgcgaag
acacccggccgcgcgctcgcgctcgacgcggcggccacgctcggcgccggcacgccggcg
ctgccgctacgcgtgctggaactcgtcgcgcgcgacaaggcctgcgagcatccggacaag
gcctgccacggcgagtcgtgcccgctcgcgcagggcttctacgaccggctgccggccgcg
cgcgacgccgcgatcgatgcggggctgctcgatcgcgacacggtgcgcgcggccgcgctc
gcgcacgacatctgtccgtactacctcgcgcaggagctggcgcgctggtccgacatggtg
atcggcgactacaactactactacgacggcagcgcgatgctgcatacgctcgcccagcag
aaccagtggcgcatcggcgtgctcgtcgacgaggcgcacaacctgctggaccgcgcgcgc
aagatgtacagcgcgtcgctcgacccgttcgcattcgcggccgcgcgcgaggccgcgccg
gcggcattgcgcaaggcattcgaccggctcgcgcgcgcgtggggcgcgctgaatcgtgcg
caggccgagcgctacgccgcctatccggacatcccggggccgatcgtgtcggccgtgcag
aacctcgtcgcggcgatcggcgagcacctggcggatgcgccgcgcgcgaacggcgacgcg
ctgctgcgctttcatttcgacgcgatccagttcggcgtgctcgccgaggcgttcgacagc
gcatcgatcttcgacgcgacgctgcacggcgagccgctgccgcgccagccggcgctcgac
ggcgtcgcgtcggccggccgccggcggcgcgtgcagtcgacgctgtgcgtgcgcaacgtg
atcccggccggctttctcgcgccgcgctacgatgccgcgcgggcgaccgtgctgttctcc
ggcacgctgagcccgttccatttctaccgcgacacgctcgggctgcccgccgacacgggc
tggctcgacgtcgacgggccgttccgcgcggaacagctgacggtgcgcgtcgcgagtcac
gtgtcgacgcgctggcgcgatcgcgaccgctcgctcgaaccgatcgcggacctgatcgcc
gcgcagtatgcggcgcggcccggcaactatctcggtttcctgagcagcttcgattacctg
cagcgcgtggtgtcgctgatgcaggtgcgtcatccggacgtgcccgtatgggcgcaggcg
cccggcatggccgaaagcgagcgcgacgcgtttctcgcgcgcttcgacgcgggcggccgc
ggcatcggcttcgcggtgctgggcggcgcgttctcggagggcgtggatctcgtcggcgag
cgcttgatcggcgcgttcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgag
cagatgcggcgcgcgatggacgcgcgcttcggcaacggctacgactacatgtatctgtat
ccgggcctgcagaaggtcgtgcaggcggcggggcgcgtgattcgcaccgagcacgacgaa
ggcgtcgtgcacctgatcgacgaccgctaccggcggcgcgaggtgcgcgacctgctgccg
cgctggtggcggatcggctga
DBGET
integrated database retrieval system
