Burkholderia cenocepacia DDS 22E-1: DM39_3608
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Entry
DM39_3608 CDS
T03308
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen00100
Steroid biosynthesis
bcen00909
Sesquiterpenoid and triterpenoid biosynthesis
bcen01100
Metabolic pathways
bcen01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DM39_3608
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DM39_3608
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bcen01006
]
DM39_3608
Enzymes [BR:
bcen01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DM39_3608
Prenyltransferases [BR:
bcen01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DM39_3608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AIO36542
UniProt:
A0AAN0RYR5
LinkDB
All DBs
Position
2:complement(272196..273260)
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AA seq
354 aa
AA seq
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MTTRTDPAYLLGDLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDR
RAALLTDLRDEIERLGDGAALARALEDVTRMQTDSHEHVLLGSMEPMLALLRAQPEADAA
SIRKVVATLTSGMEFDLRTFPDEQSGQVAALPARDVLDRYTYLVAGCVGEFWTDMTGMHT
RAARRWNLADMREKGIRFGKALQMTNILRDCAKDLRIGRCYLPEDVLGAHGLRVADLLAP
DASSRARGVLFDLLRVALAQYRDACSYTLAIPRRFVRLRLACLWPILIGLETLELLAAND
AWLDPAQPSKVPRKRIYRIMASSFAMVGSNAVICTRISALADAVDARIAGVAPR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcgtaccgatcccgcctatctgctcggcgacctgctgaagaacgtttcccgc
tccttctacctgacgctgcgcgtgctgcccgacggcatgcgcgaccccgtcggcctcgcg
tatctgctcgcgcgcgcggccgacacgatcgccgacacggcgctcgtcgcgcccgatcgc
cgcgcggcgctgctgaccgacctgcgcgacgagatcgaacggctcggcgacggcgcggcg
ctggcgcgcgcgctggaagacgtgacgcggatgcagaccgactcgcacgagcacgtgctg
ctcggctcgatggagccgatgctcgcgctgctgcgcgcgcagccggaagccgatgccgcg
tcgatccgcaaggtcgtcgcgacgctgacgtcggggatggagtttgacctgcgcacgttc
cccgacgagcagtcggggcaggtcgcggcgctgccggcgcgcgacgtgctcgatcgctat
acgtacctggtcgcgggctgcgtcggcgagttctggaccgacatgaccggcatgcatacg
cgggccgcacggcgctggaacctggcggacatgcgcgagaagggcatccgcttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgcgaaggatctgcgcatcggccgctgc
tacctgcccgaggacgtgctcggcgcgcacgggctccgcgtggccgacctgctggcgccg
gacgcgtcgtcgcgtgcgcgcggcgtgctgttcgacctgctgcgcgtcgcgctcgcgcag
tatcgcgatgcatgcagctatacgctcgcgatcccgcgccgcttcgtgcggctgcggctg
gcctgcctgtggccgatcctgatcggcctcgaaacgctcgaactgctggccgcgaacgac
gcatggctcgatccggcgcagccgtcgaaggtgccgcgcaagcgcatctaccggatcatg
gcctcgtcgttcgcgatggtcggctcgaatgcggtgatctgcacgcgcatctcggcgctc
gccgacgcggtcgacgcgcgcattgccggcgtcgcaccgcgctga
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