| Entry |
|
|---|
| Name |
(GenBank) RNB domain protein
|
|---|
| KO |
|
|---|
| Organism |
bcen Burkholderia cenocepacia DDS 22E-1
|
|---|
| Brite |
KEGG Orthology (KO) [BR:bcen00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:bcen03016]
DM39_423
Enzymes [BR:bcen01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DM39_423
Transfer RNA biogenesis [BR:bcen03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DM39_423
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1:448053..450134
|
|---|
| AA seq |
693 aa
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQEADAA
AQQIDLDFLWECAPADEFAYTALAEEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVLGLLTRPDKNAIEYKA
MEAAAGARGVSPARLMLDCGGIESPRALHEARFLAEFFPHGTGFPPVTVGPLPDDLPRAD
VEAFSIDDITTTEIDDAFSVEHLSDGRVRVGVHIAAPALGIVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRDTQEIVANETRAELVYVKNNLRHNT
LDELVTEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQQARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGTPGPKRTRM
QTTAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYSAYADYQRRMEYFWCLRWLAQEQKKQVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDAADDEEEAEGGDDTLIDAPDE
SAQAEAEALAESDDASAGEGGDAANGNPQERAS |
|---|
| NT seq |
2082 nt +upstreamnt +downstreamnt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgcccggcgggcggcgcgcgaaggtgcgcgcgaaggac
gtgctgatcgaattcgagaagccggccgcgagcgagctgatgcaggaggccgatgcggcc
gcgcagcagatcgatctggatttcctgtgggaatgcgcgccggccgacgaattcgcgtac
acggcgctggccgaagagtacttcggcgcgacctacggcccggtcgagcgcgcggcgctc
gtgctgcggctgcacggctcgcccgtctacttccgccgcaaggggcgcggccagtaccag
cgcgcgccggaagagcagctgaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctggtgcaggcgcagtacgaggaagagctgaaggccggcaagctgccggaggcgttc
gcgggcaaggtgctcgggctgctgacgcgcccggacaagaacgcgatcgaatacaaggcg
atggaagcggcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgagtcgccgcgcgcgctgcacgaggcgcgctttctcgccgaattcttcccgcac
ggcaccggctttccgcccgtcaccgtcggcccgctgccggacgacctgccgcgcgcggac
gtcgaggcgttctcgatcgacgacatcacgaccaccgaaatcgacgatgcgttctcggtc
gagcacctgtccgacggtcgcgtgcgcgtcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggcgacgcggtcgacgcgatcgcgcgcgcgcgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgactatcgcccggcgctgtcgctgtacatcatcgtcaaccgcgacacgcaggagatc
gtcgcgaacgagacgcgcgccgagctcgtctacgtgaagaacaacctgcgccacaacacg
ctcgacgagctcgtcaccgaggagacgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccagcaggcg
cgggcgggctacgggctcaagcgcgaggtgcagcgcaacaccgactacaacttctacgtc
gaaggcgagcacgtgacgatcacgccgcgccgccgcggctcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacctggggcgcgttcctgcacgatcacacggtg
cccggcatctatcgttcgcagcgcggtttcggcacgccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcacgaaggcctcggcgtgccgcagtatgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcagctgctcgcgtgcgtgcagcac
ggcgtcaccgcgaagctggccgcgccgttcaagccgaaggatgcggacctgtacgcggtc
gtgcagggcttcgacgacacctattccgcctacgccgactatcagcgccgcatggaatac
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcaggtcgtcgcgagcgtcgtg
aagggcgatctcgtgcgcctcgaggaaattccgctgctgctgcacgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagctgacgatc
gaggcgtcggtgcggctgctgaacgtgctcgatgcgccgaccgtgacgagcggcgacgcg
gccgacgacgaagaggaagccgaaggcggcgacgacacgctgatcgacgcgccggacgag
tcggcgcaggccgaggccgaagcgctggccgaatcggacgatgcgtcggccggcgagggc
ggcgacgccgcgaacggcaacccgcaggagcgcgcatcatga |
|---|
