Burkholderia cenocepacia DDS 22E-1: DM39_4276
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Entry
DM39_4276 CDS
T03308
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03030
DNA replication
bcen03410
Base excision repair
bcen03420
Nucleotide excision repair
bcen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM39_4276 (polA)
03410 Base excision repair
DM39_4276 (polA)
03420 Nucleotide excision repair
DM39_4276 (polA)
03440 Homologous recombination
DM39_4276 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcen03032
]
DM39_4276 (polA)
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_4276 (polA)
Enzymes [BR:
bcen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM39_4276 (polA)
DNA replication proteins [BR:
bcen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DM39_4276 (polA)
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DM39_4276 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM39_4276 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AIO37108
UniProt:
A0AAN0S0A9
LinkDB
All DBs
Position
2:complement(1042832..1045585)
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERRGMNVIVSTGDKDLAQLVTDRITLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLTQYDSLDGVIAHAAEIKGVVGDNLRRALDFLP
LGRKLVTVETACDLAPHLESIDVSLKTDGEARDLLRDIFARYGFKTWLREVDSAPAEGGG
ADAPEGEPAVTVGADVAREYDTIQTWAQFDAWLAKIDAAELTAFDTETTSLDPMVARLVG
LSFSTEPGKAAYLPVAHRGPDLPEQLPLDDVLARLKPWLESAERKKVGQHLKYDAQVLAN
YGIELNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
AQAAEYAAEDADITLQLHHALYPQVAREPGLQRVYREIEMPVSLVLRKMERTGVLIDDAR
LQAQSTEIATRLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNADQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRTVAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDGWLTRDKLASRMIMQVHDELVLEVPDDELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgccgactat
aaggcaaaccgcccgtcgatgccgcccgatctggcgctgcaggtcgaaccgattcacggc
gccgtgcgcgcgctcggctggccgctgctgatggtcgaaggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcgcgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtcaccgatcgcatcacgctcgtcaacacgatgaccaac
gaaacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcggatcatc
gactatctcgcactgatcggcgataccgtcgacaacgtgccgggcgtcgagaagtgcggc
ccgaagacggccgtgaagtggctgacgcagtacgacagcctcgacggcgtgatcgcgcat
gcggccgagatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcaagctcgtgaccgtcgagacggcctgcgatctcgcgccgcatctcgaatcg
atcgatgtgtcgctgaagaccgacggcgaagcgcgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaagtcgacagcgcgcccgccgaaggcggcggc
gccgatgcgccggaaggcgagccggcggtgacggtcggcgcggacgtcgcgcgcgaatac
gacacgatccagacctgggcgcagttcgacgcgtggctcgcgaagatcgacgcggccgaa
ctgaccgccttcgataccgagacgacctcgctcgacccgatggtcgcgcggctcgtcggc
ctgtcgttctcgaccgagccgggcaaggccgcctatctgccggtcgcgcaccgcggcccc
gacctgcccgagcagctgccgctcgacgacgtgctcgcgcgcctgaagccgtggctcgaa
tcggccgaacgcaagaaggtcgggcagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgggatcgagctgaacggcatcgagcacgacacgctgctcgaatcgtacgtgctcgag
tcgcaccgcacgcacgacatggacagccttgcgcttcgtcatctgggcgtcaagacgatc
aagtacgaagacgtggcgggcaagggcgcaaagcagatcggcttcgacgaagtcgcgctc
gcgcaggccgccgagtatgcggccgaagacgccgacatcacgctgcagctccatcacgcg
ctgtatccgcaggtcgcgcgcgagccggggctccagcgcgtctatcgcgagatcgagatg
ccggtgtcgctggtactgcgcaagatggagcgcaccggcgtgctgatcgacgatgcgcgc
ctgcaggcgcaaagcaccgagatcgcgacgcggctgatcgagctcgaagggcaggcgtac
gaactcgcgggcggcgaattcaacctgggctcgccgaagcagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaagaagacgccgagcggcgcgccgtcgacggatgaa
gaagtgctgcagaagctggccgaggattacccgctgccgaagctgctgctcgaacatcgc
ggcctgtcgaagctgaagtcgacctataccgacaagctgccgcgcatggtgaatccggca
acggggcgcgtgcacacgaattacgcgcaggcggtcgcggtcaccggccgcctcgcgtcg
aacgatccgaatcttcagaacattccggtgcgcacggccgaaggccgacggattcgcgag
gcgttcatcgcgtcgccgggccaccggatcgtgtcggccgactattcgcagatcgaactg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgcagggcgag
gacatccaccgtgcaaccgcggccgaggtgttcggcgtgacgccgctggaggtcaatgcc
gaccagcgccggatcgcgaaggtcatcaacttcgggctcatctacgggatgagcgcgttc
gggctcgcatcgaatctcggcatcacgcgggacgcggcgaagctctatatcgaccggtat
ttcgcgcgctacccgggcgtcgcgcagtacatggaagacacgcgcacggttgcgaaggag
aagggctacgtcgaaaccgtttttggccgccgcctgtggctgccggaaatcaacggcggc
aacggcccgcgccgccaggcggccgagcgcgcggcgatcaacgcgccgatgcagggcacc
gcggccgacctgatcaagctgtcgatgatcgcggtggacggctggctcacgcgcgacaag
ctcgcgtcgcgcatgatcatgcaggtgcacgacgaactggtgctcgaggtgcccgacgac
gagttgtcgctggtgcgcgagaagctgcccgaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctggtggcggaagtcggcgccggcgcgaactgggaggaagcgcactga
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integrated database retrieval system
