Burkholderia cenocepacia DDS 22E-1: DM39_4423
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Entry
DM39_4423 CDS
T03308
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Module
bcen_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcen03000
]
DM39_4423
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bcen01504
]
DM39_4423
Transcription factors [BR:
bcen03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DM39_4423
Antimicrobial resistance genes [BR:
bcen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
DM39_4423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AIO35541
UniProt:
A0AAN0VQ18
LinkDB
All DBs
Position
2:complement(1197150..1198145)
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AA seq
331 aa
AA seq
DB search
MDNPIRAMRIFARIVEMNSFTRAALSLGISRATATRTVQDLETALGMPLLVRTTRALRTT
PEGDAYYRRCLRITADVDELEASIRRAARHPSGPLRVELPGPVASAIVLPALGAFHARHP
DLMLMLGVSARAADMVGDAVDCSVRLGELPDSSFVARPLGALERVTCASPAYLDRCGTPR
TLDELGTHRAVGRTSGSGQRAAECDFVVDGSVRKLRLDSIVGVDDEHAYLACGVHGLGLI
QPPRAVAQPLIDAGQLREVLPQWRPAAVSVSAVYVKRPHVSPGVRAFVDWIAERFDAAAR
EQAGFVTGLAARWLAPGRGDTSVAEVSAAVA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatccgattcgcgcgatgcgcatctttgcgcgcatcgtcgagatgaacagcttt
acgcgcgcggcgctgtcgctcggcatttcgcgcgcgaccgcgacgcgcaccgtgcaggat
ctggaaacggcgctcggcatgccgctgctggtgcgcacgacgcgcgcgctgcgtacgacg
cccgaaggcgacgcgtactaccggcgctgcctgcggatcacggcggacgtcgacgagctc
gaggcgagcatccgtcgcgccgcgcggcatccgagcgggccgctgcgcgtcgagctgccg
ggcccggtcgcgagtgcgatcgtgctgccggcgctcggcgcgtttcatgcgcggcatccc
gatctcatgctgatgctcggcgtgtccgcgcgcgcggccgatatggtcggcgacgcggtc
gattgcagcgtccgcctcggcgagctgcccgattcgtcgttcgtcgcgcgcccgctcggc
gcgctcgaacgcgtgacctgcgcgagtcccgcgtatctcgatcggtgcggcacgccgcgc
acgctcgacgagctcggcacgcatcgcgcggtgggccgaacgtcggggtccgggcagcgc
gcggccgaatgcgatttcgtggtcgacggctcggtgcgcaagctcaggctcgacagcatc
gtcggcgtcgacgacgagcacgcgtacctggcatgcggcgtgcacgggctcgggctgatc
cagccgccgcgggcggttgcgcaaccgctgatcgatgcgggacagttgcgggaggtgttg
ccgcagtggcggccggcggcggtgtccgtgtcggccgtctatgtgaagcgtccgcatgtg
tcgcccggcgtgcgtgcattcgtcgactggatcgccgagcggttcgacgcggccgcgcgg
gagcaggcggggttcgtgaccgggctggcggcgaggtggctcgcgccggggcgcggtgat
acgtcggttgcggaagtgtcggcggcggtcgcctga
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