Burkholderia cenocepacia DDS 22E-1: DM39_4658
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Entry
DM39_4658 CDS
T03308
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM39_4658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcen03000
]
DM39_4658
03400 DNA repair and recombination proteins [BR:
bcen03400
]
DM39_4658
Enzymes [BR:
bcen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DM39_4658
Transcription factors [BR:
bcen03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DM39_4658
DNA repair and recombination proteins [BR:
bcen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM39_4658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AIO36610
UniProt:
A0AAN0RZB3
LinkDB
All DBs
Position
2:1456323..1457804
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AA seq
493 aa
AA seq
DB search
MVYIARMHLDPDTCYDAMLSRNRRFDGWFFVGVSTTGVYCRPVCPVKPPKARNCRYFPSA
ATAEKAGFRPCMRCRPELAPGHGLLYLSGNLADAAATLIEDGFLDNHGVDALARRVGVTE
RHLRRIFGAQFGVSPVEFAQTHRLLMAKRLLTDTALPMAVVASTAGFGSVRRFNDLFRKR
YGLNPLRLRKGAGPSDGGDMTFPLPYRPPFAWDELMRFLAQRQIAGVERVDAHGYARVVE
LPRGGNRHVTGWLSVAHVPQRLALAVTVSPALTPVVPAVLARVRRLFDLDSRPDVIDAHL
GALADGSPGLRVPGAFDGLEIALRAIAGERLAATQAAGGLARIAARFGREVEHAPPGLAY
TLPSATTLAAVPSAALEAIGIARETARAIVSLARAVADGMLALEPMAPLDATLAALRAMP
GFDERAVQYVAMRAMAWPNAFPADDAWLAARVDSTEHCDRTRMPPAAPHAARWAPWRAYA
ALHAWRLHGDGLR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggtttacattgctcgcatgcacctcgaccccgacacctgctacgacgccatgctttcg
agaaaccgccgtttcgacggctggttcttcgtcggcgtgtcgacgacgggcgtttactgc
cgcccggtttgcccggtgaagccgccgaaggcgcggaactgtcgctacttcccgagcgcc
gcgaccgccgagaaggccggctttcgcccgtgcatgcgctgccgccccgaactcgcgccc
ggccacggcctgctctacctgtcaggcaacctcgccgacgcggccgcgacgctgatcgag
gacggtttcctggacaaccacggcgtcgatgcgctcgcgcgacgcgtcggcgtgaccgag
cgccatctgcggcggatcttcggcgcgcagttcggcgtgtcgcccgtcgaattcgcgcag
acgcaccgcctgctgatggccaagcggctgctgaccgatacggcgctgccgatggccgtc
gtcgcgtcgacggccgggttcggcagcgtgcgccgcttcaacgacctgttccggaaacgc
tacggactcaatccgctgcggctgcgcaaaggcgccggcccgtccgacggcggcgacatg
acgtttccgttgccctaccggccgccgttcgcgtgggacgagctgatgcgctttctcgcg
cagcggcagatcgccggcgtcgaacgcgtcgatgcgcacggctatgcgcgcgtcgtcgaa
ctgccgcgcggcggcaatcgccacgtaacgggctggctgtcggttgcacacgtgccgcag
cgtctcgcactcgccgtcacggtatcgcccgcgctgacgccggtcgtgccggccgtgctc
gcgcgcgtgcggcggctgttcgatctcgacagccgccccgacgtgatcgatgcgcatctc
ggcgcgctcgcggacggctcgcctggcctgcgtgtgcccggcgcgttcgacggcctcgag
atcgcactgcgcgcgatcgccggtgaacggctcgcggcgacgcaggcggccggcggtctc
gcgcgaattgccgcacgcttcggcagggaggtcgaacacgcgccgccgggcctcgcgtat
acgctgccgtcagcaacgacgctggctgccgtgccgtcggcagcgctcgaagcaatcggg
attgcgcgcgaaacggcgcgggcgatcgtgtcgcttgcacgcgcagtcgccgacggtatg
ctcgcgctcgaaccgatggcgccgctcgacgcgacgctcgccgcgctgcgcgcgatgccc
ggtttcgacgaacgcgcggtgcagtacgtcgcgatgcgcgcgatggcctggccgaacgcg
ttccccgccgacgatgcatggctggccgcgcgcgtcgattcgaccgaacactgcgaccgc
acgcgcatgccgccggccgcgccgcatgccgcgcgctgggcgccgtggcgcgcgtatgcc
gcgctgcacgcgtggcgccttcatggagatggattgcgatga
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