Burkholderia cenocepacia DDS 22E-1: DM39_4737
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Entry
DM39_4737 CDS
T03308
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcen03000
]
DM39_4737
Transcription factors [BR:
bcen03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DM39_4737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
PPV_E1_C
MarR
HTH_5
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
AIO34874
UniProt:
A0AAN0RWG7
LinkDB
All DBs
Position
2:1545463..1546623
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AA seq
386 aa
AA seq
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MFLVSVSLPVGPAGTLAGSFIAEKRAARQAVKTPMSGASGSGHGAPPSRPSRPGGRLHTI
NIPHKTTPRPVRRKMPALNALKAFEMAGRTGSFTRAAELLNVTQSAVSRQVRQLEGQLGE
TLLERRHHQLELTAAGRVLLRALQQSFDKIELTVRSLQEKTHLNRLRANVPPTFAARWLM
PRLGRLRDAHPEFELSLTTRIHDSLGESRVLDCAIRFGDGEWDGFDNALLMQEQHIAVCA
PALYARLRQDDAPIDLNRFTLLHVLATDDQRYLTWQHWLKAAGITDVDTRGGYEFDLLDH
AIRAAIDGLGITIADRHMVARELATGQLMQVLNVHVDGHQSYWFVTRPEQTNLPHIVQFR
DWLQQEVWLAKRHLEPSSPLPQLPLR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgttccttgtgtccgtctcgctgccggtcggccccgccggcacacttgcgggcagcttt
atcgcagaaaagcgcgccgcgcggcaggcggtgaaaaccccgatgtccggcgcgagcggt
tccggtcatggcgcgccgccgtcgcgcccctcgcgtccgggcgggcggctgcatacaata
aacatcccgcacaaaacgacgccccgccccgtgagacgcaagatgccggcgctgaacgcg
ctgaaagccttcgagatggccggccgcaccggcagcttcacgcgagccgccgagctgctg
aacgtgacgcagagcgcggtgagccgtcaggtccgccagctcgaagggcagctcggcgag
acgctgctcgagcgccgccatcaccagctcgaactgacggcggccggccgcgtgttgctg
cgcgcgctgcagcaatcgttcgacaagatcgagctgaccgtgcgcagcctgcaggaaaag
acccatctgaaccgcctgcgcgcgaacgtgccgccgaccttcgccgcgcgctggctgatg
ccgcgcctcggccggctgcgcgacgcgcatccggagttcgagctcagcctgacgacgcgc
atccacgacagcctcggcgaatcgcgcgtgctcgactgcgcgatccgtttcggcgatggt
gaatgggacggcttcgacaacgcgctgctgatgcaggagcagcacatcgccgtttgcgcg
cccgcgctctacgcgcggctgcggcaggacgacgcgccgatcgacctgaaccgcttcacg
ctgctgcacgtgctcgcgaccgacgaccagcgctacctgacctggcagcactggctgaag
gcggccggcatcaccgacgtcgacacgcgcggcggctacgaattcgacctgctcgaccac
gcgatccgcgccgcgatcgacgggctcggcatcacgatcgccgaccgtcacatggtcgcg
cgcgaactggcaaccgggcagctgatgcaggtgctcaacgtgcacgtcgacggccaccag
tcgtactggttcgtcacgcgcccggagcagaccaacctgccgcacatcgtgcagttccgc
gactggctgcaacaggaagtgtggctcgcgaaacgtcatctcgaaccgtcgtcgccgctg
ccgcagttgccgctgcgttag
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