Burkholderia cenocepacia DDS 22E-1: DM39_5458
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Entry
DM39_5458 CDS
T03308
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen00260
Glycine, serine and threonine metabolism
bcen01100
Metabolic pathways
Module
bcen_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DM39_5458
Enzymes [BR:
bcen01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
DM39_5458
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
DM39_5458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
HI0933_like
GIDA
FAD_binding_3
Pyr_redox
DAO
Thi4
NAD_binding_7
AlaDh_PNT_C
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AIO36762
UniProt:
A0A088UJG5
LinkDB
All DBs
Position
2:2333096..2336107
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AA seq
1003 aa
AA seq
DB search
MSQKDRLGTGGRINRAIPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
VTADVAEPNAVVQLESGPYSVPNARATEIELYQGLVASSVNAEPSLENDKYAINQKLSRF
LPAGFYYKTFMWPRKMWPKYEEKIREAAGLGKAPDALDADRYDKCYAHCDVLVVGGGPSG
LAAAHAAATAGARVILVDDQRELGGSLLSCRAEIDGKPALQWVEKIEAELRKLPDVTILS
RSTAFGYQDHNLVTVTQRLTDHMPVSMRKGTRELLWKVRAKQVILATGAHERPIVFGNND
LPGVMLAGAVSTYIHRYGVLPGRNVVVFTNNDRAYQAALDLKACGAKVTVVDARASSNGA
LPAAAKRQGVTVLSGAVVTAASGKLRVSSVDVASYTNGQTGGKLQSLPCDLVAMSGGFSP
VLHLFAQSGGKACWNDEKACFLPGKPVQAEASVGAAAGEFGLARALRLALDAGAEAAKAA
GFTAAQRPVAPQVAETVEGALQPLWLVGSREAASRGPKQFVDFQNDVSAADILLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKSIPETGTTTFRPNYTPVSFGTFAG
RELGDFLDPIRKTCIHEWHVEHGALFEDVGNWKRPWYFPKNGEDLHAAVKRECLAVRNSV
GILDASTLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLA
DQHFMMTTTTGGAARVLTWLERWLQTEWPDMKVRLSSVTDHWATFAVVGPKSRKVVQKVC
QDIDFGNEAFPFMSYRNGTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSITPYDLGMGGVVAKSKDFLGKRSLSRSDTA
KQGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSTTEPTPMIGHVTSSYYSPILKRSIALA
VVKGGLDKMGESVVIPLANGKRITAKISSPVFYDTEGVRQHVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgcctcggcaccggtggccgcatcaatcgcgcgattccgctgacg
tttacgttcaacggccgcacgtatcagggcttccagggcgacacgctcgcgtccgcgctg
ctcgcgaacggcgtgcacttcgtcgcgcgcagcttcaagtaccaccgtccgcgcgggatc
gtgacggcggacgtcgcggaaccgaatgccgtcgtgcagctcgaatcgggcccgtacagc
gtgccgaacgcgcgcgcgaccgagatcgagctgtatcaggggctcgtcgcgtcgagcgtg
aacgcggagccgtcgctcgagaacgacaagtacgcgatcaaccagaagctgtcgcgtttc
ctgccggccggcttctactacaagaccttcatgtggccgcgcaagatgtggccgaagtat
gaggaaaagatccgcgaagcggccggtctcggcaaggcgcccgatgcgctcgacgccgat
cgctacgacaagtgctacgcgcattgcgacgtgctggtggtcggcggtggcccgtcgggc
ctcgcggccgcgcacgcggcggccaccgccggcgcgcgcgtgatcctcgtcgacgaccag
cgcgaactcggcggcagcctgctgtcgtgccgtgcggagatcgacggcaagcccgcgctg
cagtgggtcgagaagatcgaggccgaactgcgcaagctgcccgacgtgacgatcctgtcg
cgcagcaccgcgttcggctaccaggatcacaacctcgtgaccgtcacgcagcgcctgacc
gatcacatgcccgtgtcgatgcgcaagggcacgcgcgaactgctgtggaaggtccgcgcg
aagcaggtgattctcgcgaccggcgcgcacgagcggccgatcgtgttcggcaacaacgac
ctgccgggcgtgatgctcgccggcgcggtgtcgacctatattcatcgctacggcgtgctg
ccgggccgcaacgtggtcgtgttcacgaacaacgaccgcgcgtaccaggccgcgctcgac
ctgaaggcgtgcggcgcgaaggtgacggtcgtcgatgcgcgcgcctcgtcgaacggcgcg
ctgcctgcggccgcgaagcgtcagggcgtgacggtgttgagcggcgcggtcgtgacggcc
gcgtcgggcaagctgcgcgtatcgtcggtcgacgtcgcgtcgtacacgaacggccagacg
ggcggcaagctgcagtcgctgccatgcgacctcgtcgcgatgtcgggcggcttcagcccc
gtgctgcacctgttcgcgcagtcgggcggcaaggcatgctggaacgacgagaaggcatgt
ttcctgcccggcaagccggtgcaggcggaagccagcgtcggtgcggccgccggtgaattc
gggttggcgcgcgcgctgcgcctcgcgctcgacgcgggcgccgaggcggccaaggccgcg
ggcttcacggccgcgcagcgccccgtcgcgccgcaggtcgcggaaaccgtcgaaggcgcg
ctgcagccgctctggctggtcggcagccgcgaggccgcgtcgcgcgggccgaagcagttc
gtcgatttccagaacgacgtgtcggccgccgacatcctgctggccgcacgcgaaggcttc
gagtcggtcgagcacgtgaagcgctacacggcgatgggcttcggcaccgaccagggcaag
ctcggcaacatcaacgggatggcgatcctcgcgcaggcgctcggcaagtcgatccccgaa
accggcacgacgacgttccgcccgaactacacgccggtatcgttcggcacgttcgcgggc
cgcgagctcggcgatttcctcgacccgatccgcaagacctgcatccacgaatggcacgtc
gagcacggcgcgctgttcgaggacgtcggcaactggaagcggccctggtatttcccgaag
aacggcgaggacctgcatgcggccgtgaagcgcgaatgcctcgcggtgcgcaacagcgtc
ggcatcctcgatgcgtcgacgctcggcaagatcgacatccagggcccggacgcggtgaag
ctgctgaactggatgtacacgaacccgtggaacaagctcgaggtgggcaagtgccgctac
gggctgatgctcgacgagaacggcatggtgttcgacgacggcgtgacggtgcgcctcgcc
gatcagcacttcatgatgacgaccacgaccggcggcgcggcgcgcgtgctgacctggctc
gagcgctggctgcagacggagtggcccgacatgaaggtgcgcctgtcgtcggtcaccgat
cactgggcgacgttcgcggtggtcggcccgaagagccgcaaggtcgtgcagaaggtgtgc
caggacatcgacttcggcaacgaggcattcccgttcatgagctaccggaacggcacggtc
gcaggcgcgaaggcgcgcgtgatgcggatcagcttctcgggcgagctggcctatgaagtg
aacgtgccggccaatgcgggccgcgcggtgtgggaagcgctgatggcggccggcgccgag
ttcgacatcacgccgtacggcaccgagacgatgcacgtgctgcgtgcggagaagggctac
atcatcgtcggtcaggacaccgacggctcgatcacgccgtacgacctcgggatgggcggc
gtcgtcgcgaagtcgaaggacttcctcggcaagcgttcgctgtcgcgttcggataccgcg
aagcaaggccgcaagcagttcgtcggcctgctgaccgaggacgagcagttcgtgctgccc
gaaggcgcgcagatcatcgcgaaggacacgcaggtgtccacgaccgagccgacgccgatg
atcggccacgtgacgtcgagctactacagcccgatcctgaagcgctcgatcgcgctggcg
gtggtgaagggcggcttggacaagatgggcgagagcgtcgtgattccgctggccaacggc
aagcgcatcaccgcgaagatctcgagcccggttttctacgataccgaaggggtgcgtcag
catgtggaatga
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