Burkholderia cenocepacia DDS 22E-1: DM39_5561
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Entry
DM39_5561 CDS
T03308
Symbol
choX
Name
(GenBank) choline ABC transporter, periplasmic binding family protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DM39_5561 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcen02000
]
DM39_5561 (choX)
Transporters [BR:
bcen02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
DM39_5561 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Zincin_2
Motif
Other DBs
NCBI-ProteinID:
AIO34596
UniProt:
A0AAN0VP64
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All DBs
Position
2:2456498..2457463
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AA seq
321 aa
AA seq
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MKRQCNAATRIGAALAAAACMTATTAAHAAEPQTCRDVRMAAPGWTDIDATNAMAGVVLK
ALGYRQDIANLSVPITYQGLKKGQVDVFLGNWMPAQGPLVKPFVDEKSIDVLHANLSGAK
FTLAVPDYVAAAGVHSFADLARYADRFGGKIYGIEPGAPANQNIKRMLSDHALGTANWSL
VESSETGMLTQVERAVRDKRWIVFLAWEPHLMNTKFHPTYLSGGDAYFGPNYGGATVNTV
TRAGFADQCTNLARLFRQMTFSVDVENRMIADMLDNKTSPALAAQHALKADPALVAGWLD
GVTTSAGAPGLPAVRAALDGH
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcaatgcaatgcagcaacccggatcggcgcggcgcttgccgcggccgcctgc
atgacggcaacgactgcggcacacgcggccgagccgcagacctgtcgcgacgtgcggatg
gccgcgcccggctggaccgacatcgacgcgacgaatgcgatggcgggcgtcgtgctgaag
gcgctcggctatcggcaggacatcgcgaacctgtcggtgccgatcacgtaccaggggctg
aagaaagggcaggtcgacgtgttcctcggcaactggatgccggcgcaggggccgctcgtg
aagccgttcgtcgacgagaagtcgatcgacgtgctgcacgcgaacctgagcggtgcgaag
ttcacgctggccgtgcccgactacgtggcggccgccggcgtgcattccttcgccgatctc
gcgcgctacgcggaccgcttcggcggcaagatctacgggatcgagcccggcgcgccggcg
aaccagaacatcaagcggatgctgtccgaccacgcgctcggcacggcgaactggtcgctc
gtcgaatcgagcgagaccggcatgctcacgcaggtcgagcgcgcggtgcgcgacaagcgc
tggatcgtgttcctcgcgtgggagccgcacctgatgaacaccaagttccacccgacctac
ctgtcgggcggcgacgcgtatttcgggccgaactacggcggcgcgacggtcaacacggtg
acgcgtgccggatttgccgaccagtgcacgaacctcgcgcggctgttccggcagatgacg
ttctcggtcgacgtcgagaaccggatgatcgccgacatgctcgacaacaagacctccccc
gcgctggccgcgcagcatgcgctgaaggccgatcccgcactcgtcgcgggctggctggac
ggcgtgacgacgagcgccggcgcgcccggcctgcccgccgtgcgggccgcgctcgacggc
cactga
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