KEGG   Burkholderia cenocepacia DDS 22E-1: DM39_5755
Entry
DM39_5755         CDS       T03308                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
bcen  Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bcen00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM39_5755
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bcen02044]
    DM39_5755
Secretion system [BR:bcen02044]
 Type III secretion system
  Type III secretion core apparatus
   DM39_5755
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 type_II_gspD_N0
Other DBs
NCBI-ProteinID: AIO35898
UniProt: A0AAN0VQ68
LinkDB
Position
2:2661314..2663365
AA seq 683 aa
MRRRVASIRLPSRSLQRAALAMCATALLTASLCLSPAQPARAADLRWRNKPFTIVANGKK
IGDFIRELASSQGVTAVVDPKVDGVISGRFSGTPQQTLDTICSTYGLTWYYDGSFLYVDP
ADQSQTQMIPIPPNAAGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAV
GTVGDPSANGQHADIRAFRLKYGWASDFTINRSGKEVTVPGVATILRRLFGKGGGTGPSP
SSAPLGQAARQVKLGSGLTIAVPRLDFPDISGGPRSAGYGGDSSAGSAFSPFAGSGGGDS
LPQIEADPAINAVIVRDLPENMYRYQSLISQLDERPRIVEINVTIIDINEDSLDSLGIDW
RLHTTHGDVQIGNGASPLNGNTQYNGSGNPPLTFGIGTSETGQTGAFMPTGIALTASIGG
SLRNYLLTRVNALAQKGQAQLHSKPKVLALDNTEAILENLTQFYVQVQGYQDSSLYSVTT
GTSIKVTPMIVDDAIRNAAAVSGSPASNPQSVMMSIDIQDGNIVPGQAVSNVPVIQQRNI
VTKTMIDEGRSLLIAGFNDDEVHLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTP
RVVSTASMYAPDGSPVNPGVDAPADASGVSMYRPPDNDIAVPLTPQPLPGTKFGPPALPP
PKDAASQPAATTAGAPVHVDEHH
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgcgtcgacgcgtcgcctcgatccgccttccatcgcgcagcctgcaacgggccgcgctc
gccatgtgcgccaccgcgctgctcacggcgtcgctgtgcctgtcgccggcgcaacccgcg
cgcgccgcggatctgcgctggcgcaacaagccgtttacgatcgtcgcgaacggcaagaag
atcggcgacttcattcgcgaactcgcatcgtcgcagggcgtgacggccgtggtcgacccg
aaggtcgacggcgtgatcagcggccgcttctcgggcacgccgcagcagacgctcgacacg
atctgctcgacctacgggctcacgtggtactacgacggctcgttcctctacgtcgatccg
gccgaccagtcgcagacgcagatgatcccgatcccgccgaacgcggcgggcgaaatcggc
cgtgcgctgcaggcgatgcagattcccgacaagcgctacacgctcgtgatcaacgaccgc
gcgaacagcgtgtacgtggccgggccgcgccgctacgtcgaactcgtgcggcaggcggtc
ggcacggtcggcgatccgtcggcgaacggccagcatgcggatatccgcgcgttccggctc
aaatacggctgggcctcggatttcacgatcaatcgctcgggcaaggaagtcacggtgccg
ggcgtcgcgacgatcctgcgccgactgttcggcaaaggcggcggcacggggccgtcgccg
tcgagcgcgccgctcggccaggccgcgcgacaggtgaagctcggctcgggcctgacgatc
gcggtgccgcgcctcgactttcccgatatctccggcggcccgcgttcggccggctatggc
ggcgacagcagcgcaggcagcgcgttctcgccgttcgcgggcagcggcggcggcgattcg
ctgccgcagatcgaggccgatccggccatcaacgcggtgatcgtgcgcgacctgccggag
aacatgtaccgctaccagtcgctgatcagccagctcgacgagcggccgcgcatcgtcgag
atcaacgtgacgatcatcgacatcaacgaggattcgctcgacagcctcgggatcgactgg
cgcctgcacacgacgcacggcgacgtgcagatcggcaacggcgcgagcccgctgaacggc
aacacgcagtacaacggctcgggcaacccgccgctgaccttcggcatcggcaccagcgag
accgggcagaccggcgcgttcatgccgaccggcatcgcgctgaccgcatcgatcggcggg
tcgctgcgcaactatctgctcacgcgcgtgaatgcgctcgcgcagaaggggcaggcgcag
ctgcattcgaagccgaaggtgctcgcgctcgacaacaccgaggcgatcctcgagaacctc
acgcagttctacgtgcaggtgcagggctaccaggattcgtcgctgtacagcgtgacgacc
ggcacgagcatcaaggtgacgccgatgatcgtcgacgacgcgatccgcaatgcggccgcg
gtgtccggcagtccggcgagcaatccgcagagcgtgatgatgtcgatcgacatccaggac
ggcaacatcgtgccggggcaggccgtgtcgaacgtgccggtgatccagcagcgcaacatc
gtcaccaagacgatgatcgacgaaggccggagcctgctgatcgcgggcttcaacgacgac
gaggtgcatctcaacaagagcggcgtgccctggctgtccgacatcccgctgatcggcaac
ctgttcaagtacaccgacaagtcgggcaatcacatggagcgcttctatctgctgacgccg
cgcgtggtgtcgaccgcgtcgatgtatgcgccggacggctcgccggtgaacccgggcgtc
gatgcgccggccgatgcgagcggcgtgtcgatgtatcgcccgccggacaacgacattgcg
gtgccgctgacgccgcagccgctgcccggcacgaagttcggcccgcccgcgctgccgccg
ccgaaggatgcggcatcgcagcccgcggcgacgaccgcaggagcgcctgtccatgtcgac
gagcatcattga

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