Burkholderia cenocepacia DDS 22E-1: DM39_6037
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Entry
DM39_6037 CDS
T03308
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Module
bcen_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcen03000
]
DM39_6037
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bcen01504
]
DM39_6037
Transcription factors [BR:
bcen03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DM39_6037
Antimicrobial resistance genes [BR:
bcen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
DM39_6037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
DUF4143
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AIO36683
UniProt:
A0AAN0RZF4
LinkDB
All DBs
Position
2:complement(2972841..2973752)
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AA seq
303 aa
AA seq
DB search
MDHLHAMRIFARVARLGSFTKAAEQLQLPRPTVSNAVQYLEKHLKVRLLQRTTRRVGLTA
EGATYYERCERLLADLDDAETLFEEAGASPRGVIRVDLPERFALTRVIPALPAFHARFPD
LRVVMSTTDRFVDLVADGIDCAVRVGALSDTSLVARRVGEMAQINCAAPAYLERHGTPRS
PDDLPDHVAVGYFSSRTGRELDWEYADMDSGELHTVKMRSVVSVSSSHAYLACCVAGLGL
IQAPRDGLAPLLADGSLVEVLPEWNAAPLPVSVVFPYGRHLAPRVRIFVDWLAETLGDLS
GAG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctgcatgcaatgcgcatctttgcgcgcgtcgcccgtctgggcagcttcacg
aaggcggccgagcagttgcagctgccgcgcccgaccgtcagcaacgcggtccagtatctg
gaaaagcatctgaaggtgcgcctgctgcaacgaacgacgcggcgcgtcgggctgacggcc
gaaggcgcgacctactacgagcgctgcgagcggctgctcgccgatctcgacgatgccgag
acgctgttcgaggaagccggcgcgtcgccgcgcggcgtgatccgcgtcgacctgcccgag
cgtttcgcgctgacccgcgtgattccggcgctgccggcgttccacgcgcgctttcccgac
ctgcgcgtcgtgatgagcacgaccgaccgcttcgtcgatctggtcgcggacggcatcgac
tgcgcggtgcgcgtcggcgcgctgtccgatacgtcgctggtggcgcggcgcgtcggcgag
atggcgcagatcaattgcgcggcgcccgcctatctcgagcgccacggcacgccgcgctcg
ccggacgacctgcccgaccatgtcgcggtcggctatttctcgagccgcacgggccgcgag
ctggactgggaatatgcggacatggacagcggcgagctgcatacggtgaagatgcgcagc
gtcgtgtcggtcagcagctcgcacgcgtatctcgcgtgctgcgtcgccgggctcgggctg
atccaggcgccgcgcgacgggctcgccccgctgctcgcggacggctcgctcgtcgaagtg
ctgccggaatggaatgcggcgccgctgccggtgtcggtggtgtttccgtacgggcgccat
ctcgcgccgcgcgtgcggatcttcgtcgactggctcgccgagacgctcggcgacctgagc
ggcgcaggctga
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