Burkholderia cenocepacia DDS 22E-1: DM39_6295
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Entry
DM39_6295 CDS
T03308
Symbol
xylF
Name
(GenBank) 2-hydroxymuconic semialdehyde hydrolase
KO
K10543
D-xylose transport system substrate-binding protein
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DM39_6295 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcen02000
]
DM39_6295 (xylF)
Transporters [BR:
bcen02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
DM39_6295 (xylF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
BRCT
Motif
Other DBs
NCBI-ProteinID:
AIO30559
UniProt:
A0AAN0VK93
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All DBs
Position
3:complement(68913..69941)
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AA seq
342 aa
AA seq
DB search
MKTVTRRTVLNALAGTAALAALALCAPLAHASKDKPEIGFCIDDLRVERWSRDRDYFVAA
ATKLGAKVSVQSADSSEERQISQIENLISRGVDVIVIVPFNSKTLGNVVAEARKAGIKVV
SYDRLILDADVDAYISFDNEKVGELQAQGVYDAKPKGNYFLLGGAPTDNNAKMLREGQMK
VLKPAVDRGDIKIVGQQWVPEWSASTALRIVEDALTANNNKIDAIVASNDGTAGGAIQAL
ATQHLAGKVPVSGQDADLAAVKRVIAGTQTMTVYKPLKLIASEAAKLAVDLAKGTKPAFN
AQYDNGRKKVDTVLLQPTLLTKRNVDIVVKDGFYTQAQLASQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtgacgcgtcgtaccgtactgaacgcgctggccggcaccgccgcgctggcg
gccctcgcgctttgcgcgccgcttgcgcatgcgagcaaggacaaacccgaaatcggcttc
tgcatcgacgacctgcgcgtcgagcgctggtcgcgcgaccgcgattatttcgtcgccgcg
gcgacgaagctcggcgcgaaagtgtccgtgcagtcggcggattccagcgaggagcggcag
atctcgcagatcgagaacctgatctcgcgcggcgtggacgtgatcgtgatcgtgccgttc
aattcgaagacgctcggcaacgtcgtggccgaagcgcgcaaggcgggcatcaaggtggtg
tcgtacgaccggctgattctcgacgccgacgtcgatgcctacatctcgttcgacaacgag
aaggtcggcgaactgcaggcgcagggcgtctacgacgcgaagccgaagggcaactacttc
ctgctcggcggcgcgccgaccgacaacaacgcgaagatgctgcgcgaagggcagatgaag
gtgctgaagcccgcggtcgatcgcggcgacatcaagatcgtcggccagcagtgggtgccc
gagtggagcgcgtcgaccgcgctgcggatcgtcgaggatgcgctgaccgcgaacaacaac
aagatcgacgcgatcgtcgcgtcgaacgacggcaccgccggcggcgcgatccaggcgctc
gccacgcagcatctggccggcaaggtgccggtgtccgggcaggatgccgacctcgcggcg
gtcaagcgcgtgatcgccggcacgcagacgatgaccgtctacaagccgctcaagctgatc
gcgagcgaagcggcgaagctcgccgtcgatctcgcgaagggcaccaaacccgccttcaac
gcgcaatacgacaacggcaggaagaaggtcgacacggtgctgctgcagccgacgctgctc
accaagcgcaacgtcgacatcgtcgtgaaggacggcttctacacccaggcgcagctggcg
agccagtaa
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