Burkholderia cenocepacia DDS 22E-1: DM39_867
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Entry
DM39_867 CDS
T03308
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen00630
Glyoxylate and dicarboxylate metabolism
bcen00680
Methane metabolism
bcen01100
Metabolic pathways
bcen01120
Microbial metabolism in diverse environments
bcen01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DM39_867
09102 Energy metabolism
00680 Methane metabolism
DM39_867
Enzymes [BR:
bcen01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
DM39_867
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_21
Fer4_17
Fer4_9
Fer4_Nqo3
Fer4_8
Fer4_15
Fer4_NDSU1
Fer4_2
Fer4_4
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
AIO33879
UniProt:
A0AAN0RU89
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All DBs
Position
1:complement(934369..937317)
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AA seq
982 aa
AA seq
DB search
MSLDTNNVRQGGCGSGQCACKSAAQARVRDPFDDTDYGTPQRHADTDVTLEIDGQPVTVP
AGTSVMRAAIEAGVNVPKLCATDSLEPFGSCRLCLVEIEGRRGYPASCTTPAEAGMKVRT
QSDRLQALRRNVMELYISDHPLDCLTCPANGDCELQDMAGVVGLREVRYGFDGANHLRDA
KDESNPYFTYDPSKCIVCNRCVRACEETQGTFALTIASRGFESRVAAGESESFMASECVS
CGACVAACPTATLQEKSVVQLGQAEHSVITTCAYCGVGCSFKAEMKGTQVVRMTPHKNGL
ANEGHACVKGRFAWGYATHKDRITKPMIREKITDPWREVSWDEALTYAATQFRKLQDKYG
RDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQT
FASVGKADVIVVMGANPTDGHPVFGSRLKRRVREGAKLIVIDPRRIDVVDGPHVKATHHL
QLRPGTNVAMVNALAHVIVTEGLVADAFVAERCDTRAFEQWREFVSRAENSPEATAEVTG
VPAEQVRAAARLYATGGNAAIYYGLGVTEHAQGSTTVMGIANLAMATGNVGREGVGVNPL
RGQNNVQGSCDMGSFPHELPGYRHIGDASVRALFEEAWSATLQPEPGLRIPNMFDAALDG
SFKGLYCQGEDIVQSDPNTQHVAAALSAMECIVVQDIFLNETAKYAHVLLPGSSFLEKDG
TFTNAERRISRVRKVMPPLAGYADWEVTLMLSRALGYEMDYAHPSEIMDEIARLTPTFSG
VSYAKLDALGSIQWPCNEAAPEGTPTMHIDTFVRGKGKFVITQFIASPEKVTQRYPLILT
TGRILSQYNVGAQTRRTENVQWHQEDRLEIHPHDAQDRGIRSGDWVGIESRAGQTVLRAL
VTERMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVMPVAQPSDWQRAYAR
FNAEQLDLLERRAAPAPVTTGK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgacacgaacaacgtccgccaaggcggctgcggctcgggccaatgcgcgtgc
aagagcgccgcacaggcgcgtgtgcgcgacccgttcgacgataccgactacggcacgccg
cagcgccacgcggataccgatgtcacgctcgaaatcgacggccagcccgtcaccgtgccg
gccggcacgtcggtgatgcgcgccgcgatcgaagctggcgtcaacgtgccgaagctctgc
gcgaccgattcgctcgagccgttcggctcgtgccgcctgtgcctcgtcgagatcgagggc
cgccgcggctatccggcctcgtgcacgacgcccgccgaagccgggatgaaggtgcgcacg
cagtcggaccggctgcaggcgctgcgccgcaacgtgatggagctgtacatctccgatcac
ccgctcgactgcctcacctgccccgccaacggcgactgcgagctgcaggacatggcgggc
gtggtcgggctgcgcgaggtgcgctacggcttcgacggcgcgaatcatctgcgcgatgcg
aaggacgagtcgaatccgtacttcacgtacgacccgtcgaagtgcatcgtctgcaatcgc
tgcgtgcgcgcctgcgaggaaacccagggcacgttcgcgctgacgatcgcctcccgcggc
ttcgaatcgcgcgtcgccgccggcgagagcgaatcgttcatggcgtcggaatgcgtgtcc
tgcggcgcgtgcgtcgcggcctgcccgacggccacgctgcaggagaagtcggtcgtccag
ctcgggcaggccgagcattcggtgatcaccacctgcgcatactgcggcgtcggctgctcg
ttcaaggccgagatgaagggtacgcaggtcgtgcggatgacgccgcacaagaacgggctc
gcgaacgaaggccatgcgtgcgtgaagggacgctttgcgtggggctacgcgacgcacaag
gaccgcatcacgaagccgatgatccgcgagaagatcaccgacccgtggcgcgaagtgagc
tgggacgaggcgctcacctatgcggcgacgcagttccgcaagctgcaggacaagtacggc
cgcgattcgatcggcggcatcacgtcgtcacgctgcacgaacgaggaaacctacctcgtg
cagaagctggtgcgcgccgcgttcggcaacaacaacgtcgacacctgcgcgcgcgtctgt
cactcgccgaccggctatggcctgaagacgacgctcggcgaatcggccggcacgcagacc
ttcgcgtcggtcggcaaggccgacgtgatcgtcgtgatgggtgcgaacccgaccgacggc
cacccggtgttcggttcgcggctgaagcgccgcgtgcgcgaaggcgcgaagctgatcgtc
atcgatccgcgtcgcatcgacgtggtcgacggcccgcacgtgaaggccacccaccacctg
cagcttcgccccggcaccaacgtcgcgatggtcaacgcgctcgcgcacgtgatcgttacc
gaagggctcgtcgccgacgcgttcgtcgccgagcgctgcgacacgcgcgcgttcgagcag
tggcgcgagttcgtgtcgcgtgccgagaattcgcccgaggctaccgccgaggtgacgggc
gtgccggccgaacaggtgcgcgccgccgcgcggctctacgcgacgggcggcaacgccgcg
atctactacgggctcggcgtgaccgagcacgcgcaaggctcgaccaccgtgatgggcatc
gcgaacctcgcgatggcgaccggcaacgtcgggcgcgaaggcgtcggcgtcaatccgctg
cgcggtcagaacaacgtgcagggctcgtgcgacatgggctcgttcccgcacgaactgccc
ggctaccggcatatcggcgacgcgagcgtgcgcgcgctgttcgaggaggcatggtcggcg
acgctgcagccggaaccgggcctgcgcatcccgaacatgttcgatgcggcgctcgacggc
agcttcaaggggctctactgccagggcgaggacatcgtccagtcggatccgaacacgcag
catgtcgcggccgcgctgtcggcgatggaatgcatcgtcgtgcaggacatcttcctgaac
gaaaccgcgaagtacgcgcacgtgctgctgcccggctcgtcgttcctcgagaaggacggc
accttcacgaacgcggaacgccgcatctcgcgcgtgcgcaaggtgatgccgccgctggcc
ggctatgcggactgggaagtgacgctgatgctgtcgcgcgcgctcggctacgagatggat
tacgcgcatccgtcggaaatcatggacgagatcgcgcggctcacgccgaccttctcgggc
gtgtcgtacgcgaagctcgacgcgctcggcagcatccagtggccgtgcaacgaggccgcg
ccggaaggcacgccgacgatgcacatcgacacgttcgtgcgcggcaagggcaagttcgtg
atcacgcagttcattgcgtcgccggagaaggtcacgcagcgctatccgctgatcctgacc
acgggccgcatcctgtcgcaatacaacgtcggcgcgcagacgcgccgcaccgagaacgtg
cagtggcatcaagaggatcgtctcgaaatccatccgcacgacgcgcaggatcgcggcatc
cggagcggcgactgggtcggcatcgaatcgcgtgccgggcagacggtgctgcgcgcgctc
gtgaccgaacgcatgcagccgggcgtcgtgtacacgacgttccacttccccgaatcgggc
gcgaacgtgatcacgacggacagttcggactgggcgacgaactgccccgagtacaaggtg
acggccgtgcaggtgatgcccgtcgcgcagccgtccgactggcagcgtgcgtatgcgcgt
ttcaacgccgagcagctcgacctgctcgagcgtcgcgcggcgccggctcccgtgacgact
ggcaagtga
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