Burkholderia cenocepacia DDS 22E-1: DM39_972
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Entry
DM39_972 CDS
T03308
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DM39_972 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcen03019
]
DM39_972 (rnc)
03009 Ribosome biogenesis [BR:
bcen03009
]
DM39_972 (rnc)
03036 Chromosome and associated proteins [BR:
bcen03036
]
DM39_972 (rnc)
Enzymes [BR:
bcen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DM39_972 (rnc)
Messenger RNA biogenesis [BR:
bcen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DM39_972 (rnc)
Ribosome biogenesis [BR:
bcen03009
]
Eukaryotic type
90S particles
RNase
DM39_972 (rnc)
Prokaryotic type
rRNA processing factors
DM39_972 (rnc)
Chromosome and associated proteins [BR:
bcen03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DM39_972 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AIO31473
UniProt:
A0AAN0VL52
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All DBs
Position
1:1037136..1038398
Genome browser
AA seq
420 aa
AA seq
DB search
MPLSQLESRLRYEFRNAELLRQALTHRSHSATHNERLEFLGDSVLNCAVAALLFQRFSKL
DEGDLSRVRANLVKQQSLYEIAQALNISEGLRLGEGELRSGGFRRPSILADAFEAIIGAV
FLDGGFEAAQGVIKRLYIPILDHIDPRTLGKDAKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALDEVMAAAPMLAAKPKRSKNARAA
KHAEPEIVPGVKGVQEALDLRSPERKERAAAREAKAAQAAQAAAGSAAEPADRAAQPPLA
AIRAAHVETTADKAERAAKPAADKPAAADKSATDKPATDKPVDRGDAAPRTTDKSSGHAA
DPAASSADAGARSTDKSAAGADSASRAAPRVLDVAAAGPDTSPGAASVVGARARAADADH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatcccagttggaaagccggctgcgctacgaatttcgcaatgcggaattgttg
cgccaggctttgacccatcgtagtcacagtgccacgcacaacgagcggctcgagtttctc
ggcgattccgttctgaattgcgcggtggccgcgcttttgttccagcgtttcagcaaactg
gacgaaggcgacctgtcgcgcgtgcgcgccaatctcgtcaaacagcagtcgctgtacgaa
attgctcaggccctgaatatttcggaaggcctgcggctcggcgagggcgaactgcgcagc
ggcggcttccgccgcccgtcgatcctagcggacgcgttcgaagccatcatcggggccgta
ttcctcgatggcggcttcgaagccgcccaaggggtcatcaagcggctctatatcccgatc
ctcgaccacatcgatccgcgcacgctcggcaaggacgcgaagacgctgctgcaggagtac
ctgcaggggcacaagatcgcgctgccgacctatacggtcgtggcgacccatggtgcggcg
cacaatcagcagttcgaggtcgaatgcacggtgccgaagctcgacgtgaaggtgtcgggt
tccggcgcaagccggcgtgcggccgagcaggccgccgcgaagaaggcgctcgacgaggtg
atggcggccgcgccgatgctggcggccaagccgaagcgctcgaagaatgcgcgcgcggcg
aagcatgcggagccggaaatcgtgccgggcgtgaagggcgtgcaggaggcgctcgacctg
cgctcgccggagcgcaaggaacgcgcggcggcgcgcgaggccaaggcggcgcaggcagcc
caggccgcggccggcagcgcggcggagccggccgaccgggcggcccagccaccgctggcc
gcgattcgcgcagcgcacgtcgaaacgacggccgacaaggccgagcgggcggcgaaaccg
gcggccgacaagccggcggctgccgacaagtcagcgactgacaagccggcgaccgacaag
ccggtcgatcgcggcgacgctgcgccgcgtacgaccgacaagtcgtcgggacacgcggcc
gatccggcggcttcgtccgccgacgcgggcgcgcgcagcaccgacaagtccgccgccggc
gccgattccgcttcgcgcgcggcgccgcgcgtgctcgatgtcgccgccgccggccccgat
acgtcgccgggtgcggccagtgtcgtgggcgcgcgggcgcgcgccgccgatgccgaccac
tga
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