Burkholderia cenocepacia H111: I35_0218
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Entry
I35_0218 CDS
T03804
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I35_0218 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bceo03019
]
I35_0218 (recQ)
03400 DNA repair and recombination proteins [BR:
bceo03400
]
I35_0218 (recQ)
Enzymes [BR:
bceo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I35_0218 (recQ)
Messenger RNA biogenesis [BR:
bceo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I35_0218 (recQ)
DNA repair and recombination proteins [BR:
bceo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I35_0218 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CDN58741
LinkDB
All DBs
Position
1:252848..254695
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQ
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPASWDATREAQMA
LSCVFRAQRASGFNFGSSHLIEILRGGRTEKVLQRGHDQLSTFGIGAALSEPEWRAIFRQ
LVAYGYLAVDHGGFGALMLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGARERARWDALRAWRAETAKTDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaatactcgacgaagtctttggttattccgcctttcgcggccag
cagggcgagatcgtcgagcacgtcgccggcggcggcgattgcctcgtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagattcccgcactgttgcgccgcgaggccgggcag
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgttg
agcgaagtcggcgtgcgcgcggcctacctgaattcgacgctgtcgggcgccgaggccgcg
gccaccgagcgcgcgctgcgcgaaggcgaaatcgacctgctgtacgtcgcgccggagcgc
ttgatgacggggcgcttcctcgagctgctcgagcgcgcgaagatcggtctgttcgcgatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccgcccggaatacatccagctg
tcggtgctgcacgagcgcttcccgtccgtgccgcgcatcgcgctgaccgccacggccgat
gcgatcacgcgcgacgagatcatccatcgtctcgcgctcgacgacgcgcgcgtgttcgtg
tcgagcttcgaccgtccgaacatccgttaccggatcgtcgaaaaggacaacgcgcgcgcg
cagctgctcgacttcatccgcgccgagcacacgaatgccgacggcacgaccgatgcgggt
gtcgtctattgcctgtcgcgccgcaaggtcgaggaaacggctgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtatcacgcggggatggaattcgaggtgcggcagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagcccgacgtgcgcttcgtcgcgcacctcgatttgccgaagagcgtcgaaggc
tattaccaggaaaccggccgcgccggccgcgacgggatgcccgcgaacgcgtggatggcg
tatggcctgggcgacgtcgtccagcaacgcaagatgatcgacgagtccgatgcggacgac
gcgcacaagcgcgtgcagacgtcgaagctcgatgcgctgctcgggttgtgcgagacgatc
tcgtgccgccgcgtgcggctgctgaattacttcggcgaggcgagccagccgtgcggcaac
tgcgacacgtgcctcgagccgcccgcgtcgtgggatgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaatttcggctcgagccacctg
atcgagatcctgcgcggcgggcgtaccgaaaaggtgttgcagcgcggccacgaccagctc
agcacgttcggcatcggcgcggcgctgtccgagcccgagtggcgcgcgattttccggcag
ctcgtcgcgtacggctacctggcggtcgaccatggcggcttcggcgcgctgatgctgacc
gaggccgcgaagcccgtgctgaagaacgaggaaaaagtcacgctgcgccgctacgtgaag
ccgcagcgcacccgccagtcgtcgagccgcagcggcacgcgcgtcgacccgacggccggc
atgggcgcccgcgagcgtgcgcggtgggacgcgctgcgcgcatggcgcgcggaaaccgcg
aagacagacggcgtgccggcctacgtgatcttccacgacgcgacgctcgccgaaatcgca
cgcaacgcgccggagacgatcgacgacctgcgccacattcccggcatgggcgtgcgcaag
ctcgagcgcttcggcgacgagatcatcgacgtcgtcgaatcggcctga
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