Burkholderia cenocepacia H111: I35_1347
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Entry
I35_1347 CDS
T03804
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo03420
Nucleotide excision repair
bceo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I35_1347
03430 Mismatch repair
I35_1347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bceo03400
]
I35_1347
Enzymes [BR:
bceo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I35_1347
DNA repair and recombination proteins [BR:
bceo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I35_1347
MMR (mismatch excision repair)
Other MMR factors
I35_1347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDN59870
LinkDB
All DBs
Position
1:1458190..1460553
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AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDSQEAGWIVEEIRSLINTGMARSEVAVLYRSNAQSRSI
EHTLMSSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGGFANLIAKMRADTQHMNLPDTVEHIVRASG
LADFYQGEREGQDRLENLQELVNAATAFIAEEGYGLDTPARSIPLRAGAIAAPELGTATD
DPAVDVLDPASPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRSDNAGYGRDWFARPGGGSREQIVDAAVSA
PLPAFADKQRAADAGFRVGQQVFHTKFGEGTVTALEGNGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccccgaacaactcgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcaggggctggcagcggcaagacccgcgtgctgatcacgcgc
atcgcttggttgatccagcagggctatgcatcgccgcccaccgtgctcgccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggtacgttccacggcctgtgcaaccggatgctgcgcacgcactgg
cgcgacgccggcctgccgcagaccttccagatcctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgaaaagtatccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgcccggacaaggtcgacgcgacc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcagtgccagcgc
gaaggcgtcgtcgatttccccgagctgctgctgcgctgctacgaactgctcgcgtacaac
gcgccgctgcgcgcgcactaccaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctcgcgggcggcgagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgacgcggcgaaccagctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgcaccgacgccggccatggcgaaccggtgcgcgtgtacgaagcc
agcacggattcgcaggaagccggctggatcgtcgaggagatccgctcgctgatcaatacc
gggatggcgcgcagcgaagtggccgtcctgtaccgcagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgtcgtcgggcattccgtaccgcgtgtacggcggcctgcgctttttc
gagcggcaggaagtgaagcacgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacacggcattcgcgcgcgtcgtgaatttcccgacgcgcggcatcggtgcgcgctcgatc
gagcaactggccgacgccgcgcgcctgtacggctgctcgatggccgcggcgattccgtac
gtgaccggcaaggccggcacgagcctcggcgggttcgcgaacctgatcgcgaagatgcgc
gccgacacgcagcacatgaacctgcccgacaccgtcgagcacatcgtacgcgcgagcggt
ctcgccgatttctaccagggcgagcgcgaagggcaggatcgcctcgagaacttgcaggaa
ctcgtgaacgcggccaccgcgttcatcgccgaggaaggctacggactggacacgccggcc
cgctcgatcccgctgcgcgcgggggcgatcgcggcgcccgaactcggcaccgcgacggac
gatccggcggtcgacgtgctcgatcccgcctcgcccgccgaccctgcacagaaccccgac
acgatgacgccgctcgccggcttcctgtcgcatgcgtcgctggaggccggcgacaaccag
gcgcaggccggccaggacgccgtgcagctgatgacggtgcacgcggcgaaggggctcgag
ttctcggccgtgttcatcacggggctcgaggaagggttgttcccgcacgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcaaagccggatgctgcacggccagacccgctac
aacgtgcgctcgcgcttcttcgacgagttgcccgagcacgtgttgaagtggctcacgccg
aaggtcgaggccggctcgcgctggggcggacgttcggacaacgccgggtacgggcgcgac
tggttcgcgcggccgggcggcggcagtcgcgagcagatcgtcgacgcggccgtgtccgcg
ccgctgcccgcgttcgcggacaagcagcgcgcggccgacgccggcttccgggtcggccag
caggtgttccataccaagttcggcgaaggcacggtcaccgcactcgaaggcaacggcacc
gatgcgaaggcgcaggtgaagttcaagcgccacggcgagaaatggctcgcgctggcggtc
gcgaaactgcaggcggtggaatga
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