Burkholderia cenocepacia H111: I35_1811
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Entry
I35_1811 CDS
T03804
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
bceo
Burkholderia cenocepacia H111
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bceo03021
]
I35_1811 (rpoS)
Transcription machinery [BR:
bceo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I35_1811 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
CDN60334
LinkDB
All DBs
Position
1:complement(1964877..1965965)
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AA seq
362 aa
AA seq
DB search
MPKSKRHEPQAESEKISRATQASVGRVGASTDDEDDVAENERDLEARDAEAEGGDDEREG
RQEAAPDVDDFRTLLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFEARQVM
IERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSI
ERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMSTGEAAERREASIDDIAYLTGKTA
EEVTDILALNEHTASLDAPLDLDPASSLLDLLPDDQSQSPDAEVQHRELETLTRAWLSRL
SDKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDA
VL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcgaagcgccacgagccgcaagccgagtctgagaagatcagtcgtgccacg
caagcatcggtggggcgagtgggtgcttcgacggacgacgaagacgacgtcgcggaaaac
gaacgtgatctcgaggcacgcgacgccgaggccgaaggtggcgacgacgagcgcgaaggc
cgtcaggaagccgcgcccgacgtcgacgatttccgcacgctgctgcaggccgaactcacg
gccgacacgatccagcattacctgaaccgcatcagcgtgaagccgctgctgaccgtcgag
gaagagcagcgctattcgcgtcttgcgaaggccggcgaattcgaggcgcggcaggtgatg
atcgagcgcaacctgcgtctcgtcgtcagtatcgcgaaggggtacctgaaccgcggcgtg
ccgctgctcgacctgatcgaggaaggcaacctcggcctgatgcacgcgatcgagaaattc
gacccgacgcgcggttttcgcttctcgacctacgcgacgtggtggatccggcagagcatc
gagcgggcgatcatgaaccaggcccgcacggtgcgcctgcccgtgcacgtgatccgcgaa
ctgaaccaggtgctgcgcgcgaagcgccacctcgaaaagaattcgatgtcgacgggcgag
gcggccgaacgccgtgaagccagcatcgacgacatcgcctatctcaccggcaagaccgcc
gaggaagtcaccgatatcctcgcgctcaacgaacacacggcgtcgctcgacgcgccgctc
gacctcgatcccgcgagcagcctgctcgacctgctgcccgacgaccagagccagtcgccc
gacgccgaggtgcagcaccgcgagctcgaaacgctgacgcgcgcgtggctgtcgcggctg
tccgacaagcaccggcacgtgatcgagcgccgcttcggcctgaaccacatcgaaccggcg
acgctcgaggagctcgccgacgagatggggctcacgcgcgagcgcgtgcggcagatccag
caggaagcgctggtgcgcctcaagcggttctttgcctccaacggcgtgcgcaaggacgcc
gttctgtaa
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