Burkholderia cenocepacia H111: I35_2272
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Entry
I35_2272 CDS
T03804
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I35_2272 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bceo03019
]
I35_2272 (pnp)
03016 Transfer RNA biogenesis [BR:
bceo03016
]
I35_2272 (pnp)
Enzymes [BR:
bceo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I35_2272 (pnp)
Messenger RNA biogenesis [BR:
bceo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I35_2272 (pnp)
Transfer RNA biogenesis [BR:
bceo03016
]
Prokaryotic type
tRNA degradation factors
I35_2272 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
CDN60795
LinkDB
All DBs
Position
1:complement(2471813..2473954)
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AA seq
713 aa
AA seq
DB search
MFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFPLT
VDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVLSV
NPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQIKASSLDLVVA
GTERAVLMVESEADQLSEDVMLGAVVFGHEQMQIAIDAIHELVRDGGKPEWDWQPAPKNE
ALIARVTELAQNDLLAAYQLRDKQARSAKLKEVYAATSAKLEEDALAAGTVAADKATVGN
ILFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVVAT
LGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVKCL
PSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNKF
AVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHILG
KMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDGVV
TIASTSSDGMAEAKKRIEQITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISEIV
NERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAAAQSDTPPQQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctcgaaacc
ggtgaagtcgctcgccaggcgagcggcgccgtgatcgtcgacgtcgaagacaccgtcgtg
ctcgcaaccgtcgtcggcgcgaagtcggcgaagccgggccaggacttcttcccgctgacc
gtcgactacctcgagaaaacctattcggccggcaagatcccgggcggcttcttccgccgc
gaaggccgtccgtcggagcacgagacgctgacgtcgcgcctgatcgaccgtccgctgcgc
ccgctgttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtgctgtccgtg
aacccggaaatcccggcggacatccccgcgctgatcggcgcatcggctgcgctcgccgtg
tcgggcctgccgttcaacggcccggtcggcgccgcacgcgtcgcgtacatcgacaacgcg
tacgtgctgaacccgacgcgtgaccagatcaaggcatcgagcctcgacctcgtcgtcgcg
ggtaccgagcgcgccgtgctgatggtcgaatcggaagccgaccaactgtcggaagacgtg
atgctgggcgcggtggtgttcggccacgagcagatgcagatcgcgatcgacgcgatccac
gaactggtgcgcgacggcggcaagcccgagtgggactggcagccggcgccgaagaacgag
gcgctgatcgcacgcgtgaccgagctggcgcagaacgatctgctcgccgcttaccagctg
cgcgacaagcaggcacgttcggcgaagctgaaggaagtctacgcggcgacctcggcgaag
ctcgaggaagacgcgctggcggccggcacggtcgcggccgacaaggccaccgtcggcaat
atcctgttcgacatcgaagcgaagatcgtccgctcgcagatcctgaacggcgagccgcgc
atcgacggccgcgacacgcgcaccgtgcgcccgatcgaaatccgcaccggcgtgctgccg
cgtacccacggctcggcgctgttcacgcgcggcgagacgcaggcgctggtcgtcgcgacg
ctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggcgaataccgcgagcgc
ttcatgcttcactacaacatgcccccgttcgcgaccggcgaaacgggccgcgtcggttcg
ccgaagcgccgcgaaatcggccacggccggctggccaagcgcgcgctggtcaagtgcctg
ccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgaatcgaac
ggttcgtcgtcgatggcatcggtgtgcggcggctgcctcgcgctgatggacgccggcgtg
ccgatgaaggcgcacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaacaagttc
gcggtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttcaaggtg
gccggcaccgagcaaggcgtgacggcgctgcagatggacatcaagatccagggcatcacg
aaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggtcgcatgcacatcctcggc
aagatgacctcggcggtgtcgggtgcgaacacgcaactgtcggaattcgcgccgcgcatg
atcaccatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggttcggtg
atccgcgcgctgacggaagaaacgggcacgaccatcgacatctcggatgacggcgtcgtg
acgatcgcgagcacgagcagcgacggcatggccgaagcgaagaagcgcatcgagcagatc
acggccgagatcgaagtcggccaggtgtacgaaggcacggtgctcaagctgctcgatttc
ggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctcggaaatcgtc
aacgagcgcgtgaaggacatcaacgactacctgaaggaaggtcagcaggtgaaggtcaag
gtgatccagacggacgagaagggtcgcgtgcgtctgtcggccaaggcgctgctgaatgaa
gcagcggctgcagcgcagtcggatacgccgccgcagcagtaa
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