Burkholderia cenocepacia H111: I35_2339
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Entry
I35_2339 CDS
T03804
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase Bcep18194_A5658
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I35_2339 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bceo03019
]
I35_2339 (rhlE)
Enzymes [BR:
bceo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I35_2339 (rhlE)
Messenger RNA biogenesis [BR:
bceo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I35_2339 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
aq_1923
RPC3_helical
Motif
Other DBs
NCBI-ProteinID:
CDN60862
LinkDB
All DBs
Position
1:complement(2542641..2544125)
Genome browser
AA seq
494 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVA
EGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKTQIERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGATGDALSL
CSPNERKQLADIEKLIKRPLEMQTLKLDKPARHRHDERGGERGGERGGERGGRRDRDEHR
GASGRRSSGSAERGGHHRRHETPVDDFFLKPYEPSASAKQPDDAQPAQQPEKKGPKRQVA
ALLGGFGMPRKPSA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgtcgccaagcccgtcgacgcaaccttcgatcaattcggccttgccgcc
gatatcctgaaagccattgcggagcagggctatacgacgccgacgccgatccaggcgcag
gccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggcaccggc
aagaccgcgagcttctcgctgccgatcatccagcgtctgctgccgcaggccaacacgagc
gcgtcaccggcgcgccacccggtgcgtgcgctgatcctcacgccgacccgcgaactcgcc
gaccaggtcgccgcgaacgtgcacgcgtatgcgaagcacacgccgctgcgcagcgcggtg
gtgttcggcggcgtcgacatgaacccgcaatcggccgaactgcgccgcggcgtcgagatc
ctgatcgcgacgccgggccgcctgctcgaccacgtgcagcagaagacggcgaacctcggc
caggtgcagatcctcgtgctcgacgaagccgaccggatgctcgacatgggcttcctgccc
gatctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgttgttctcggcc
accttctcgggcgaaatcaagaagctcgcgtcgacctacctgcgcaacccgcagacgatc
gaggtcgcgcgcagcaactcgacgaacgcgaacgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggccgtcgtgcagttgctgcgcgatcgcggcctcaagcaggtg
atcgtgttctgcaacagcaagatcggtgcgagccgcctcgcgcgcaatctcgagcgcgac
ggcgtggtcgcatcggcgatccacggcgacaagacgcagatcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaggcgctggtcgcgaccgacgtggccgcgcgcggt
ctcgacatcgccgagctgccggccgtgatcaacttcgacctgccgttcagcgcggaagac
tacgtgcaccggatcggccgtaccggccgcgcgggtgcgacgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgtccgctc
gaaatgcagacgctcaagctcgacaaaccggcgcgccatcgtcacgacgagcgcggcggc
gagcgtggcggtgagcgcggtggcgaacggggcggccggcgcgatcgcgacgagcatcgc
ggtgcctcgggccgccggtcgtcgggcagcgccgagcgcggtggccatcatcgccgccac
gaaacgccggtcgacgatttcttcctgaagccgtacgagccgtcggcgtcggcgaagcag
ccggacgacgcgcagcccgcgcagcagcccgagaagaaagggccgaagcgccaggtcgcc
gcgctgctcggcggcttcgggatgccgcgcaagccgtcggcataa
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