Burkholderia cenocepacia H111: I35_2735
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Entry
I35_2735 CDS
T03804
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I35_2735 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bceo03019
]
I35_2735 (rhlE)
Enzymes [BR:
bceo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I35_2735 (rhlE)
Messenger RNA biogenesis [BR:
bceo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I35_2735 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Ric8
Sacchrp_dh_NADP
Cas3-like_C_2
DegT_DnrJ_EryC1
CMS1
CARD_2
Motif
Other DBs
NCBI-ProteinID:
CDN61258
LinkDB
All DBs
Position
1:2956562..2957995
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AA seq
477 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYAEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
QRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGGGGGGNRQPRAGGSGQPAAKR
DGHAQPKAAKPRTQGGAGAGGNGGGRPAGGGNGARPANGNAAHANRNRSSRSGQRGH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatctctcggcctggccgaaccgctggtcaaggcggtcaacgagctcggc
tatacgtcgccgaccccaatccagcagcaggcgatcccggccgtcctcggcggcggcgac
ctgctcgccggcgcacagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
caacgcctgcacacgttctacgccgagcaccgtggcgcgaagcgcgcggtgcgcgcgctg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtccgtgcgtacagc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccaggccgcctgctcgatcac
atgcagcagaagaccatcgacttgtcggatctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cagcgtcagaacctgctgttctcggccaccttctccgatgaaatcaaggcgctcgccgac
agcctgctcgactcgcccgccctgatcgaagtcgcgcgccgcaacacgaccgccgagagc
gtcgcgcagaagatccacccggtcgatcgcgaccgcaagcgcgagctgctcacgcacctg
atccgcgaacacaactggttccaggtgctcgtgttcacgcgcaccaagcacggcgcgaac
cggcttgccgagcagctgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctggccgagttcaagaacagcacgctgcaggtgctc
gtcgcgaccgatatcgccgcgcgcgggatcgacatcgaccagttgccgcacgtcgtcaac
ttcgacctaccgaacgtgcccgaggattacgtgcaccggatcggccgcacgggccgcgcg
ggtgcgaccggcgaagccgtgtcgctcgtgtgcgtcgacgagaagcagttgctgcgcgac
atcgagcggctgatcaagcgcgagatcccgcaggaagtgatcgcgggcttcgaacccgat
ccgaacgcgaagccggagccgatccagcagcgccgcgggcagcagcaaccgcgtggcggt
ggcggcggcggcaatcgccagccgcgcgccggcggctcaggccagccggccgcgaaacgc
gacggccacgcgcaaccgaaggccgcgaagccgcgcacgcaaggcggtgccggcgccggt
ggtaacggcggcggacgtccggcgggcggcggcaacggcgcccgcccggcgaacggcaac
gccgcgcacgcgaaccgcaaccgttcgtcgcgcagcggccagcgcggtcactga
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