Burkholderia cenocepacia H111: I35_3159
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Entry
I35_3159 CDS
T03804
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo00300
Lysine biosynthesis
bceo00470
D-Amino acid metabolism
bceo01100
Metabolic pathways
bceo01110
Biosynthesis of secondary metabolites
bceo01120
Microbial metabolism in diverse environments
bceo01230
Biosynthesis of amino acids
Module
bceo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I35_3159 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I35_3159 (dapF)
Enzymes [BR:
bceo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I35_3159 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
CitF
Motif
Other DBs
NCBI-ProteinID:
CDN61682
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All DBs
Position
1:3403752..3404681
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AA seq
309 aa
AA seq
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MAAGRPCRADRLVRHGIPDPVKLSFTKMHGAGNDFVVLDGYSRALPPLTDAQVRALANRH
FGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVSDRGLTDKRSVRV
QVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFDAAGLDGRQEGRDTLWPLDVGGATRWI
STVSMGNPHAVQVVDDAEAYPVLEEGPLIERHARFPQRVNAGFMQIVSRREVKLRVYERG
AGETLACGTGACAAVAAGIRRGLLDSPVTVHTHGGTLTIGWDGARDEAAALMMAGPATTV
FEGEIDLNA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggccgtccgtgtcgtgccgaccgcctcgttcgccatggaattccggaccca
gtgaaactctcgttcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tattcgcgcgcgctgccgccgctcaccgacgcgcaggtgcgcgcactcgccaaccgccat
ttcggcatcggcgccgaccagttgctgctggtcgagaaaccgaccgtcgacggcgcggat
ttcaagtaccggatcttcaattgcgacggcggcgaggtcgagcactgcggcaacggcgcg
cgttgtttcgtgaagttcgtcagcgaccgcggcctgaccgacaagcgcagcgtgcgcgtg
caggtcatgaagggcctgatcacgctgacgctgcaggacaacggcgaagtcgtcgtcgac
atgggcgcgcccgtgttcgcgccggcgcaggtgccgttcgacgcagcggggctcgacggc
cgccaggaaggccgcgacacgctgtggccgctcgacgtcggcggcgcgacgcgctggatc
tcgacggtgtcgatgggcaatccgcacgccgtgcaggtcgtcgacgatgccgaagcgtat
ccggtgctggaagaaggcccgctgatcgagcgtcatgcgcgcttcccgcagcgcgtgaac
gccggcttcatgcagatcgtgtcgcgccgcgaagtgaagctgcgcgtgtacgaacgcggc
gcgggcgagacgctcgcgtgcggcaccggcgcatgcgcggcggtcgcggccggcatccgg
cgcggcctgctcgattcgcccgtgaccgtgcacacgcacggcggcacgctgacgatcggc
tgggacggcgcgcgcgacgaagccgccgcgctgatgatggccggccccgccacgaccgtg
ttcgaaggcgagatcgacctgaacgcctga
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